Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi550g00002 ATGTTGATACCGATGATGGGAACAAGCGTGGTTGAGATGCTGGAAAAGTGGAGGGCAATGGCCGAGAAAGAAAAGGGTGAGGTGGAAATCGAAGTTTCGGAGTGGTTTCAAACCCTAACAGAAGATGTTATTACTATGACAGCATTCGGAAGTAGCTACGAAGATGGCAAACCCATTTTCCAGCTACAATCCCAACAAATGCTCTTAGCAGCTGATGCATTCAATAAAGGCTTCATCCCAGGATATAGATTTTTTCCGACGAGGAGGAATATAAAGTCTTGGAAATTGGGGAAGGAAATTAGGAAATCACTGGTGAAGCTCATCAATCGACGGAAAGAGAATTTGTGTAATGTGAAGAAAGGACACAAGGATTTGCTGGGGCTCATGATTCAGGCTTCTACCTCCAAGTCTAACACCTTCAAAGTCACGGTGGATGATATCGTGGAAGAGTGCAAGACCTTTTTCTTTGCTGGCAAACACACCATCTCAAACTTGCTGACGTGGACCACCATTCTCCTTGCTATGCACCAACAGTGGCAGGTAAAAGCACGTGAGGAGCTTCTCAGTGTGTGTGGAGCACGTGACATTCCCACCAAGGACGACCTCGCAAAGCTCAAGACGTTGATGATGATCGTGAACGAGTCCTTGAGACTGTACCCTCCAACAATAGCAACAATAAGAAGAGCAAAATGTGATGTTGAGCTAGGAGGTACCTATAAGATCCCATGTGGGACCGAACTCTTGATTCCCATACTGGCAGTTCATCACGATAAGGCCACGTGGGGAAGCGATGCAAACAAGTTCAATCCTGCTCGTTTCTCTGAGGGTGTGTCCCGCGCTGCGAAGCACCCTTTCGCGTTCATATCGTTCGGTCTTGGTGTGCGCACTTGCATTGGTCAAAACCTTGCGGTTCTTCAAACTAAATTGGCACTTGCAATCATGTTGCACCATTTCACCTTCAGGTTGGCCCCGAGCTATCAGCACGCACCAACGGTTCTCATGCTGCTTTATCCTCAGTTTGTTTAA 1026 0.4669 MLIPMMGTSVVEMLEKWRAMAEKEKGEVEIEVSEWFQTLTEDVITMTAFGSSYEDGKPIFQLQSQQMLLAADAFNKGFIPGYRFFPTRRNIKSWKLGKEIRKSLVKLINRRKENLCNVKKGHKDLLGLMIQASTSKSNTFKVTVDDIVEECKTFFFAGKHTISNLLTWTTILLAMHQQWQVKAREELLSVCGARDIPTKDDLAKLKTLMMIVNESLRLYPPTIATIRRAKCDVELGGTYKIPCGTELLIPILAVHHDKATWGSDANKFNPARFSEGVSRAAKHPFAFISFGLGVRTCIGQNLAVLQTKLALAIMLHHFTFRLAPSYQHAPTVLMLLYPQFV 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi550g00002 341 SUPERFAMILY Cytochrome P450 3 334 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi550g00002 341 Gene3D Cytochrome P450 1 338 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi550g00002 341 PRINTS E-class P450 group I signature 287 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi550g00002 341 PRINTS E-class P450 group I signature 166 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi550g00002 341 PRINTS E-class P450 group I signature 297 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi550g00002 341 PRINTS E-class P450 group I signature 39 57 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi550g00002 341 PRINTS E-class P450 group I signature 146 163 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi550g00002 341 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 290 299 IPR017972 GO:0005506|GO:0016705
Sebi550g00002 341 PANTHER CYTOCHROME P450 FAMILY MEMBER 3 339 - -
Sebi550g00002 341 PRINTS P450 superfamily signature 157 174 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi550g00002 341 PRINTS P450 superfamily signature 210 221 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi550g00002 341 PRINTS P450 superfamily signature 297 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi550g00002 341 PRINTS P450 superfamily signature 288 297 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi550g00002 341 Pfam Cytochrome P450 5 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi550g00002 Sebi-Chr550 221000 222869 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi550g00002 1 339 Cytochrome P450 AT2G26710 69.275 1.60e-175 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi550g00002 K15639 - gmx:100786200 535.028