Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi54g00018 ATGAGCGGTGAGGATGATGACCCAGAAAATAGGAGATTGAAATTAAGACAAGAAGCGTTGAATTTGAAACCTTATTCTCGGCTCAGTAACTTCCAACGCGATCTCATGGCTGGGGCGGTGATGGGTGGAATGGTGCACACCATTGTGGCCCCAATTGAAAGGGCCAAGCTATTGTTGCAGACCCAGGAAAGTAACTTGGCTATTATTGCCAGTGGTCGTCGCAAATTCAAGGGCATGTTGGATTGTATATTCCGTACTGTCAGGGAAGAAGGGATTCTCTCTCTGTGGCGAGGCAATGGTAGCAGTGTTCTTCGCTATTATCCTTCCGTCGCACTCAATTTCTCTCTTAAGGATCTTTATAGAAGCATGTTAAGAGGTGGAAACTCTAATAACAATCTTTTCTCTGGTGCATCAGCTAATTTTATTGCTGGGGCTGCAGCTGGTTGTACATCACTTATCTTAGTATACCCTCTTGATATTGCACACACCCGCCTTGCTGCTGACATTGGAAGGACAGAAGTGTGCCAATTCCGAGGAATTTACCATTTCTTGGCCACCATACTCCAAAAGGATGGGGTTCGTGGGATTTACAGGGGCCTTCCTGCATCTCTACAAGGGATGGTGGTACACAGGGGTCTTTATTTTGGAGGCTTTGATACAATGAAAGAAATGTTATCTGAAGATTCAAAACCTGAGTTGGCATTGTGGAAGCGTTGGATGGTAGCTCAGGCAGTCACAACCTCTGCTGGTTTGATATCTTATCCATTAGACACGGTTCGAAGGAGGATGATGATGCAGTCTGGGATGGAACAGCCAGTGTACAATAGCACTTTGGATTGTTGGAAGAAGATCTATAGAACAGAGGGGGAACTATTATTTAAGGTGAAATGTTCTCCAGCCTTACCTCATAAGGCAAGTCACGGAAAGATGTCCAAGTCAACATGGACCCAAGTAAGGAAAAGTGCAAGTGTACAACGCATCTTCACCTGA 990 0.4505 MSGEDDDPENRRLKLRQEALNLKPYSRLSNFQRDLMAGAVMGGMVHTIVAPIERAKLLLQTQESNLAIIASGRRKFKGMLDCIFRTVREEGILSLWRGNGSSVLRYYPSVALNFSLKDLYRSMLRGGNSNNNLFSGASANFIAGAAAGCTSLILVYPLDIAHTRLAADIGRTEVCQFRGIYHFLATILQKDGVRGIYRGLPASLQGMVVHRGLYFGGFDTMKEMLSEDSKPELALWKRWMVAQAVTTSAGLISYPLDTVRRRMMMQSGMEQPVYNSTLDCWKKIYRTEGELLFKVKCSPALPHKASHGKMSKSTWTQVRKSASVQRIFT 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi54g00018 329 PRINTS Mitochondrial carrier protein signature 242 264 IPR002067 GO:0055085
Sebi54g00018 329 PRINTS Mitochondrial carrier protein signature 34 47 IPR002067 GO:0055085
Sebi54g00018 329 PRINTS Mitochondrial carrier protein signature 197 215 IPR002067 GO:0055085
Sebi54g00018 329 PRINTS Mitochondrial carrier protein signature 47 61 IPR002067 GO:0055085
Sebi54g00018 329 PRINTS Mitochondrial carrier protein signature 98 118 IPR002067 GO:0055085
Sebi54g00018 329 PRINTS Mitochondrial carrier protein signature 150 168 IPR002067 GO:0055085
Sebi54g00018 329 SUPERFAMILY Mitochondrial carrier 29 291 IPR023395 -
Sebi54g00018 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 237 321 IPR018108 -
Sebi54g00018 329 Gene3D Mitochondrial carrier domain 27 306 IPR023395 -
Sebi54g00018 329 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 28 289 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Sebi54g00018 329 PRINTS Adenine nucleotide translocator signature 76 97 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Sebi54g00018 329 PRINTS Adenine nucleotide translocator signature 109 121 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Sebi54g00018 329 PRINTS Adenine nucleotide translocator signature 135 148 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Sebi54g00018 329 PRINTS Adenine nucleotide translocator signature 238 254 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Sebi54g00018 329 PRINTS Adenine nucleotide translocator signature 31 43 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Sebi54g00018 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 135 224 IPR018108 -
Sebi54g00018 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 29 123 IPR018108 -
Sebi54g00018 329 Pfam Mitochondrial carrier protein 30 125 IPR018108 -
Sebi54g00018 329 Pfam Mitochondrial carrier protein 138 228 IPR018108 -
Sebi54g00018 329 Pfam Mitochondrial carrier protein 234 289 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi54g00018 Sebi-Chr54 296857 301987 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi54g00018 28 311 Antiporters AT3G08580 39.863 2.21e-57 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi54g00018 K05863 - gmx:100797251 482.641