Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi54g00016 ATGATGTTCATGGATTTGGAATGGGTGTTTCCAATTCCAGATGTCCCTTATGCTTCAACAATGTTCACCATGCTGGCGTTAATAGGAGGGTTGTTGGTCTATTTGTATGGGCCCTATTGGGGAGTGAGGAAGGTTCCAGGCCCACCATCTCTGCCTCTGGTAGGACACCTTCCTTTGTTGGCTAAGTATGGCCCTGATGTGTTCTCAGTCCTCGCCAAGCAATATGGCCCAATCTACAGATTTCATATGGGAAGACAGCCACTAATAATTATAGCAGATGCAGAGCTTTGTAAAGAGGTTGGAATAAAAAAATTTAAAGACATTTCAAACAGAAGTATTCCTTCGCCCATCTCTGCATCCCCTCTTCACCAAAAGGGCCTTTTCTTCACCCGACTTGCAACTGATGTGATTGGACAAGCTGCATTTGGTGTCAACTTTGGCCTCTCTAAGCCTCAATCAATTTGTGATGAAATCAATAGTGTTGTTAACAACCAAGTTGGGGATGCTAGTGCTAGCAATGAAGTATCTGATTTCATTAACCAACACATTTACTCTACAACCCAACTTAAGATGGATTTGTCTGGTTCCTTCTCCATCATTCTTGGTCTACTTGTCCCAATACTCCAGGAACCATTTAGGCAGATTTTGAAGAGAATACCAGGTACCATGGACTGGAAAATTGAGCGTACTAACCAGAAACTAAGTGGCCGTCTTGATGAGATTGTAGAAAAGAGAATGAAAGATAAGATCAGAACTTCCAAGGATTTCTTGTCACTCATACTAAATGCTAGAGAATCAAAAGCTGTATCAGAAAATGTGTTCACACATGACTATATCAGTGCTGTTACTTATGAGCACCTACTTGCTGGTTCAGCTACCACATCCTTTACCTTATCTTCCATTATCTATTTGGTTGCTGCACATCCAGAAGTTGAGAAAAAACTGCTTCAAGAGATTGATGGGTTTGGTCCAATAGATCAGATACCTACTTCTCAAGATCTTCATGACAAGTTCCCTTATCTTGATCAGGTGATCAAAGAGGCCATGAGGTTTTACACTGTCTCCCCATTAGTTGCAAGAGAAACATCAAATGAAGTAGAGATTGGAGGTTACCTTCTTCCAAAGGGAACTTGGGTCTGGTTAGCCCTTGGAGTTCTAGCAAAGGATCCTAGAAACTTTCCAGAACCAGAAAAGTTCAAACCAGAGAGGTTTGAGCCTAACTGTGAGGAAATGAAACGAAGGCATCCTTATGCTTTTATACCATTTGGAATTGGTCCTCGAGCCTGCATTGGTCAGAAATTTTCCCTACAAGAGATCAAGCTTTCTCTGATTCATTTATACAGGAAATATTTGTTTAGGCATTCACCTAACATGGAAAACCCTTTAGAACTCGAATATGGCATAGTCCTCAACTTCAAGCAAGGTGTCAAGCTCAGAGTCATAAAAAGAACAGATAGGAGCTGCTGA 1467 0.4131 MMFMDLEWVFPIPDVPYASTMFTMLALIGGLLVYLYGPYWGVRKVPGPPSLPLVGHLPLLAKYGPDVFSVLAKQYGPIYRFHMGRQPLIIIADAELCKEVGIKKFKDISNRSIPSPISASPLHQKGLFFTRLATDVIGQAAFGVNFGLSKPQSICDEINSVVNNQVGDASASNEVSDFINQHIYSTTQLKMDLSGSFSIILGLLVPILQEPFRQILKRIPGTMDWKIERTNQKLSGRLDEIVEKRMKDKIRTSKDFLSLILNARESKAVSENVFTHDYISAVTYEHLLAGSATTSFTLSSIIYLVAAHPEVEKKLLQEIDGFGPIDQIPTSQDLHDKFPYLDQVIKEAMRFYTVSPLVARETSNEVEIGGYLLPKGTWVWLALGVLAKDPRNFPEPEKFKPERFEPNCEEMKRRHPYAFIPFGIGPRACIGQKFSLQEIKLSLIHLYRKYLFRHSPNMENPLELEYGIVLNFKQGVKLRVIKRTDRSC 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi54g00016 488 Pfam Cytochrome P450 46 129 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi54g00016 488 Pfam Cytochrome P450 128 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi54g00016 488 PRINTS E-class P450 group I signature 419 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi54g00016 488 PRINTS E-class P450 group I signature 342 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi54g00016 488 PRINTS E-class P450 group I signature 298 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi54g00016 488 PRINTS E-class P450 group I signature 382 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi54g00016 488 PRINTS E-class P450 group I signature 429 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi54g00016 488 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi54g00016 488 PRINTS E-class P450 group I signature 278 295 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi54g00016 488 PANTHER THROMBOXANE-A SYNTHASE 131 484 - -
Sebi54g00016 488 SUPERFAMILY Cytochrome P450 46 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi54g00016 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 422 431 IPR017972 GO:0005506|GO:0016705
Sebi54g00016 488 PRINTS P450 superfamily signature 289 306 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi54g00016 488 PRINTS P450 superfamily signature 420 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi54g00016 488 PRINTS P450 superfamily signature 429 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi54g00016 488 PRINTS P450 superfamily signature 343 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi54g00016 488 Gene3D Cytochrome P450 130 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi54g00016 488 Gene3D Cytochrome P450 35 129 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi54g00016 Sebi-Chr54 200638 209476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi54g00016 83 483 Cytochrome P450 AT2G26170 67.181 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi54g00016 K20771 - gmx:100797803 835.099