Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi549g00061 ATGGAGTGCAACAAGGATGAGGCGCTGAGGGCTAGACAAATTGCTGAAAGTAGAATGCAAAGAGGTGAATTTGTAGAGGCACTCAAGTTTGCTATGAAGGCCAAAGCTCTGTATCCTGACATTGAAAACATTGCTCAGATACTTACGGTTTGTGAGGTTCACAATGCTGCAATGAACAAACTCTCTGGGTGTCTCATGGACTGGTATAGAATTCTTCAGACTGAAGGATTGGCAGATGAAGCAACCATCAAGAAACAGTACAGGAAGCTTGCACTATTACTTCATCCTGATAAAAATAAATTTTCTGGCGCAGAAGCTGCTTTCAAGTTGATTGGGGAAGCCAATAGGGTGTTGAGTGACCGAGCAAATCGATCTTTGTATGACATCAAGTTTAAAGGCTCTGTGAGAACTGCGGCACCTAAGACCTCACCCCCTCCCTCAAATGGGAATGAATTTGCAGCAGCTAAACATGATGGAAATGCAACAAATTATCAGAAAAATTCCTATTCAAACCCCAACTGGAGGAATGCCCATCAGCAAGCTCAACAGCAGACTTTCTGGACATGTTGCCATTATTGTAGTGCAAAGTACCAATACTACACAAATGCTGTAAATAAATCCATATTCTGTCGAAATTGTTTGAAACCCTTTGTAGCTCATGTTTTAAGGTACAACGGTGTCCCACCAGGACCATATATCCAGAAGCATGATCCGCCAAAACCAGCCTCAGAAAGTAAAGATGGAAAACCCCGTGGTGGAGGATTTACTGTGCGGTCACATCCTATACCTATGAAAAAATGTGCTACTGGAGTTGATGGGAAACATACAGGCGAAAATAATACAGATGGCTGTGTTCCTGTGTCCAAAGACATGGAGTCACAAACCACAACCAATGTTGGAAGTAAGAGAGTAAGGCAGTCAGCACCAGATTCAGGAGAAAGTTTTAAAGCTGGAAATGGTGTTCACATGAAAGATGCTGGAAATGGTGATCACATGAAAGATGCCAATGTACGAGAAAATTATGCTGATCCTTCAGGATTTAATGCTAGGAGATCTTCCAGGAAAAGACAACATGTTTCTTACGTGGAAACCCCTGAAGATGACGATTTTGAGATTCCTTCCAAAATGCCACGGCAAAATGGTTCATTTAACACCGATGAAGTTGAGAAAAAGAACGTGGCTGCTAGTGGTGGGTCGTCCAAGAACAATAATCCAGCTAGTTATACTGCTGGTGTGGTTGATCAGAATGGAGAGGTGAGAAATAAAGCAAGTAGTCCACCTGAAGAAACATGTTTGAAGAATAAAAGCCAATTTGAGCAATCTCATGTTCAAGGAGAGAAGGTATTGGAGTCAGATCTTGATCGTGGAAAATCAAAAGAGGACCAACGCGCTTCATTAAATTCAAAGGCCTCCTCTGGTCCAGATATCATTGTTTGTCCTGATACAGATTTCAATGATTTTGAGAAGGATAAGATGGATGATTGCTTTGCGGTTAATCAATTATGGGCAATTTATGATTCCACTGATGCTATGCCTCGATTTTATGCACTTATCAGGAAAGTGTTCTCCCCTTTCAAGTTAAAGATTACTTGGTTGGAACCTGATCCAGATAACCAAGGGGAGATTGATTGGCATGGTGCAGATTTGCCTATTGCTTGCGGTAAGTTCAAACTTGGTGATTCTCAGAAAATTACAGATCGTGCTATGTTCTCTCATCAGATGCAGTGCATACAAGGAAGTGGCAATGGTTCTTATCTGATATATCCTAAGAAGGGAGAAACTTGGGCAATTTTCAGAAATTGGGATATCAAATGGAGTTCTAATCCAGAAAATTATTTGATGTGTGAATTTGAATATGTAGAAATCCTATCAGATTTTGCTGAGAATGTTGGCATTGAAGTTGCATACCTGGGCAAAGTGAACGGGTTCATTAGCCTCTTTCAGAAAACTGAGAAGAATGGAGTGTTCATATTTTGTGTTCTACCTAATGAGCTATACAGGTTCTCACATCCAATTCCTTCATACAAGATGACTGGTAATGAAAGGGAAGGTGTTCCAAGAGGATCTTTTGAACTTGATCCTGCTGCTTTGCCAAATAACTTGTTTGAAGTTGGTGGTTCCAGTAATGTGAAGATGGTGAATGGAATGTTAAACACTGGAGTGGGGCAAGCGGTGGCTGGCTAA 2184 0.4112 MECNKDEALRARQIAESRMQRGEFVEALKFAMKAKALYPDIENIAQILTVCEVHNAAMNKLSGCLMDWYRILQTEGLADEATIKKQYRKLALLLHPDKNKFSGAEAAFKLIGEANRVLSDRANRSLYDIKFKGSVRTAAPKTSPPPSNGNEFAAAKHDGNATNYQKNSYSNPNWRNAHQQAQQQTFWTCCHYCSAKYQYYTNAVNKSIFCRNCLKPFVAHVLRYNGVPPGPYIQKHDPPKPASESKDGKPRGGGFTVRSHPIPMKKCATGVDGKHTGENNTDGCVPVSKDMESQTTTNVGSKRVRQSAPDSGESFKAGNGVHMKDAGNGDHMKDANVRENYADPSGFNARRSSRKRQHVSYVETPEDDDFEIPSKMPRQNGSFNTDEVEKKNVAASGGSSKNNNPASYTAGVVDQNGEVRNKASSPPEETCLKNKSQFEQSHVQGEKVLESDLDRGKSKEDQRASLNSKASSGPDIIVCPDTDFNDFEKDKMDDCFAVNQLWAIYDSTDAMPRFYALIRKVFSPFKLKITWLEPDPDNQGEIDWHGADLPIACGKFKLGDSQKITDRAMFSHQMQCIQGSGNGSYLIYPKKGETWAIFRNWDIKWSSNPENYLMCEFEYVEILSDFAENVGIEVAYLGKVNGFISLFQKTEKNGVFIFCVLPNELYRFSHPIPSYKMTGNEREGVPRGSFELDPAALPNNLFEVGGSSNVKMVNGMLNTGVGQAVAG 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi549g00061 727 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Sebi549g00061 727 MobiDBLite consensus disorder prediction 231 472 - -
Sebi549g00061 727 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 704 - -
Sebi549g00061 727 Pfam Domain of unknown function (DUF3444) 476 681 IPR024593 -
Sebi549g00061 727 MobiDBLite consensus disorder prediction 377 411 - -
Sebi549g00061 727 SUPERFAMILY Chaperone J-domain 60 131 IPR036869 -
Sebi549g00061 727 PRINTS DnaJ domain signature 103 123 IPR001623 -
Sebi549g00061 727 PRINTS DnaJ domain signature 69 87 IPR001623 -
Sebi549g00061 727 PRINTS DnaJ domain signature 87 102 IPR001623 -
Sebi549g00061 727 SMART dnaj_3 66 123 IPR001623 -
Sebi549g00061 727 CDD DnaJ 67 120 IPR001623 -
Sebi549g00061 727 MobiDBLite consensus disorder prediction 445 464 - -
Sebi549g00061 727 MobiDBLite consensus disorder prediction 281 308 - -
Sebi549g00061 727 MobiDBLite consensus disorder prediction 356 374 - -
Sebi549g00061 727 Pfam DnaJ domain 67 128 IPR001623 -
Sebi549g00061 727 MobiDBLite consensus disorder prediction 418 444 - -
Sebi549g00061 727 MobiDBLite consensus disorder prediction 239 253 - -
Sebi549g00061 727 Gene3D DnaJ domain 66 187 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi549g00061 Sebi-Chr549 667354 669537 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi549g00061 4 229 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.034 1.23e-22 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi549g00061 - - aprc:113873604 944.88