Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi549g00050 ATGGCATGTCAGTTTCCAAGTCAAGAAGAAGCAGTTCTTCAAGAATTTCACAATTATACTGCTGTTTGGGGTCCTCGGAACAGTGATTTCATTCTGTCTCATATCTGTAGGCACTCTACAGATCGTGAAGTTGCACTCATGATGTTGATGGCTTATTTGTCATATATGATCGCTGAGCTTTTGAATCTCAGTGGGATTTTGACTATTTTCTTCTGTGGCATTGTTATGTCACACTACACATGGCACAATGTTACAGGAAGCTCAAGGACAACAACCAAGCATTCCTTTGCAACTATCTCATTCATTGCTGAAACCTTTATATTTCTGTATGTTGGCATGGATGCTTTAGACATTGACAAATGGAAAAGAAGCAAAGCCAGTCATTTTCTTAACACATTACCATGTTGGAACAGCATAGGAACTTCAGTTGCTGTCAGTTCAACCTTGATTGCATTAGTGTTGATTGGAAGAGCAGCTTTTGTGTTCCCTATTGCAAACATTAAAAATTGCATCAAGACAAGAGAGAGTACCAAAATTGAGTTTCGATCACAGTTCACAAAATCCAAGACAACATCAGCTCAAGACTCTGCATTAATAATAACCTCAACTATAATCGTTGTGCTATTCAGTACTGTGGTATTTGGTTCCATAACAAAGCCTCTGATTGAGGCTGTGCAGCTAAGGCATTCAAAACCAGCCATTTCTGATTCCACTGATAATCAAGAAGATGTGAGATTTCTTTTCCTTCAAAACAGTGGTTCAATTAACCAAAGCAACAATCAGACATTTGAAAGGCGAAGTAACCTGAGTTTGCTAATAAGTCATCCAGCTACAACGGTTCACTACTTTTGGAGGAAATTTGATGATAACTTTATGAGACCAGTATTTGGTGGAAGGGGTTTCACTCCGATTGTTCCTGGTTCTGGTGAAGAAGAGGAGATTGCTTGA 948 0.3892 MACQFPSQEEAVLQEFHNYTAVWGPRNSDFILSHICRHSTDREVALMMLMAYLSYMIAELLNLSGILTIFFCGIVMSHYTWHNVTGSSRTTTKHSFATISFIAETFIFLYVGMDALDIDKWKRSKASHFLNTLPCWNSIGTSVAVSSTLIALVLIGRAAFVFPIANIKNCIKTRESTKIEFRSQFTKSKTTSAQDSALIITSTIIVVLFSTVVFGSITKPLIEAVQLRHSKPAISDSTDNQEDVRFLFLQNSGSINQSNNQTFERRSNLSLLISHPATTVHYFWRKFDDNFMRPVFGGRGFTPIVPGSGEEEEIA 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi549g00050 315 Pfam Sodium/hydrogen exchanger family 32 223 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Sebi549g00050 315 PANTHER SODIUM/HYDROGEN EXCHANGER 30 296 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi549g00050 Sebi-Chr549 569732 572990 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi549g00050 34 313 Antiporters AT5G27150 52.805 4.62e-101 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi549g00050 K14724 - qsa:O6P43_026859 378.252