Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi549g00042 ATGGAAGTTAACACTACTAACACTGCAGGGCCACCCACTGTTGCTACAAAGAACCATACTTTCACACAGCACCACTTAAATTCAGAAAACCATAAACACAGCCATGACCATTTCCCCTTCAAAGCCATTCTCATAACCATTTCAGTGAATGAAACTAGCAAAGATGACAGTAGAATACTTCATGACACAAGCAGCAGGCTCATAGCTTCAACAATGTTAAACTCTAATTCTAGCCCAGATGTGAAGGGTGGGTGTCTTTATGGGGGAAATTTGAGCAGGACACCAACACCTAAATTTAGAGGAGTTCAAGTGTTTACTTATAGGGAGCTAGAAGTTGCAACGGATGGATTCAGTGAAGCAAATGCGATTGGTAATGGAGGGGTTGGTTTGATATATAAAGGAGTCTTAAGTGATGGCACTTTGGCAGCAATTAAGTTGCTGAGGAGTGAAGGTAAGCAAGGAGAGCGTGCATTCAGAATTGAGGTCGATCTCCTAAGCCGGTTGCACTCTCCTTATTTGGTGGAGTTACTTGGCTATTGTGCTGACCAAACCACAGTCTCACCAGTGATCCACCGAGACTTCAAGAGTAACAATGTTCTACTGGATCAAAATTTCCGTGCCAAGGTGTCAGATTTTGGATTGGCTAAGATGGGATCAGAGAAGAGGAATGGTCAAGTTTCCACCCGTGTGTTGGGGACCACTGGATATTTGGCACCAGAGTACGCCTCCACGGGTAAGCTCACTACAAAGTCAGATGTTTACAGCTATGGTGTGGTTCTTCTCGAACTGCTAACAGGACGTGTACCAGTTGACATTAAAAGGGCCCCTGGAGAACACGTCCTTGTCTCTTGGGCTCTTCCTAGGTTGACGAACAGAGAAAAGGTGGTGGAAATGGTTGACCCAGCTCTACGCGGACAGTACTCAAAGAAGGATTTAATTCAGATAGCTGCCATTGCAGCAATGTGCATACAGCCAGAAGCGGATTACAGGCCGCTCATGACAGATGTTGTACAATCATTGACATTGGGTGAAAAACAACATGTAATACCATACTTGATGGGATATCATCAAATTGCCAACTTAGATCAGCGGAAATCCGTCACCCCTACTGCTTTCAACAGCGGAGACGAGGGGAGGGGAAAATGCAAAACACAAAGGCACTTCAAATCTGCTTAA 1176 0.4481 MEVNTTNTAGPPTVATKNHTFTQHHLNSENHKHSHDHFPFKAILITISVNETSKDDSRILHDTSSRLIASTMLNSNSSPDVKGGCLYGGNLSRTPTPKFRGVQVFTYRELEVATDGFSEANAIGNGGVGLIYKGVLSDGTLAAIKLLRSEGKQGERAFRIEVDLLSRLHSPYLVELLGYCADQTTVSPVIHRDFKSNNVLLDQNFRAKVSDFGLAKMGSEKRNGQVSTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDIKRAPGEHVLVSWALPRLTNREKVVEMVDPALRGQYSKKDLIQIAAIAAMCIQPEADYRPLMTDVVQSLTLGEKQHVIPYLMGYHQIANLDQRKSVTPTAFNSGDEGRGKCKTQRHFKSA 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi549g00042 391 PANTHER OS07G0668900 PROTEIN 66 184 - -
Sebi549g00042 391 MobiDBLite consensus disorder prediction 371 391 - -
Sebi549g00042 391 ProSiteProfiles Protein kinase domain profile. 1 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi549g00042 391 Pfam Protein tyrosine and serine/threonine kinase 188 340 IPR001245 GO:0004672|GO:0006468
Sebi549g00042 391 SUPERFAMILY Protein kinase-like (PK-like) 97 340 IPR011009 -
Sebi549g00042 391 Gene3D Phosphorylase Kinase; domain 1 90 186 - -
Sebi549g00042 391 Gene3D Transferase(Phosphotransferase) domain 1 187 360 - -
Sebi549g00042 391 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 178 348 - -
Sebi549g00042 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi549g00042 Sebi-Chr549 481138 484314 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi549g00042 85 341 Receptor kinase-like Gene Family AT3G58690 56.129 1.04e-115 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Sebi549g00042 PK_Tyr_Ser-Thr 2.5e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi549g00042 - - gmx:100809810 515.383