Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi549g00024 ATGAACGATCAAAGCACTCAAATTCAAATGCTCGCTGAAAAATTTCACCGCTTCGTTCTTGATTGCGAACTCAAGCAATCGTCAACTGCTAACCGTTCAGATAATGTATCGAAGCAAGTGAACGATAACGATAACTCTGACTCCATGGATGAAAACAGTTTGTCCAATGGAATCCATGAAACTTCTCCAGATCAGGATCACACACTCCCGATTTTAAAGAAAATCCTTAGTCTGAGTACCAAAATTCAGGATTTGAAGAAGCAGCACATAGCCTTATCTAACCAAGTTAAAGTGAATCTCACAACTGAATCGTTTCCGGGCCTTGACGTTTTGAACTCTATTCAGCTTCTCGGCACTGAATATGAGCTTTTGAAAAGAAAGTATCTTGAGGAATGCTCTGAACGCCGGAGGCTTTACAATGAAGTAATTGAACTCAAGGGAAATATTAGGGTTTTCTGCAGATGCAGACCGTTAAACGAAAGTGAAATTGCAAATGGGTCTGCATCTGCTGTCAATTTTGAATCATCTTCTGATAATGAGCTTCAAGTCATCTGCTCAGATTCTTCCAAGAAGCAATTTAAATTTGATTACGTATTTAGGCCTGAAGATAACCAAGAGGCTGTTTTTTCCCAAACTAAACCCATCGTTACATCAGTATTGGATGGGTTTAATGTCTGCATTTTTGCCTATGGGCAAACTGGAACTGGTAAAACATTTACAATGGAGGGAACGCCAGAACACAGGGGAGTTAACTACAGAACCCTGGAGGAATTATTTCGGATAGCTGAAGAGAGACATGGTGTAATGAAGTATGAATTGCATGTTAGCATGTTAGAGGTTTACAATGAGAAGATAAGAGATCTCTTGGTGGAAAATTCTACCCAACCTACCAAGAAGAAATTGGAGATAAAGCAAGCTGCAGAAGGAACCCAAGAAGTCCCAGGACTTGTTGAAGCTCGTGTTTGTGGAACAGAAGATGTGTGGGAATTGCTTAAGACTGGAAATCGAGTCAGGTCTGTTGGATCCACCTGTGCTAATGAGCTTAGCAGCCGTTCTCATTGCTTGTTGCGAGTAACTGTTGTTGGGGAGAATTTGATCAACGGCCAGAAAACAAGGAGTCACCTTTGGCTAGTAGACTTGGCTGGCAGTGAGCGTGTTGGAAAAACTGAAGCCGAAGGAGAAAGACTGAAGGAATCTCAATTCATAAATAAGTCTCTTTCAGCACTCGGTGATGTTATTTCTGCCCTTGCTTCCAAATCAGCCCACATCCCTTACAGGAACTCGAAGCTCACTCATATACTGCAGAGCTCTTTAGGAGGAGATTGCAAAACGTTAATGTTTGTCCAAGTAAGTCCAAGCGCAACAGACTTAGGAGAGACACTTTGTTCCTTGAATTTTGCCACCCGTGTCCGCGGAATCGAGAGTGGCCCAGCTCGCAAGCAAGTTGACCTCAGTGAGCTGTTTAAGTACAAGCAAATGGCAGAAAAGCTCAAACATGAGGAGAAGGAAACTAAGAAATTACAGGACAACTTTCAAACCTTGCAACTCAGGCTTGCTGCTAAAGAACACCATTGTAGAAACCTTCAGGAAAAGGTTCGGGACCTTGAGAACCAGGTAGCAGAAGAAAGAAAAACCAGACTAAAGCAAGAAAGTAGATCACTTGCTGCTGTTTCAGCTCAACCTTCATCATCAAAACACACAGCAGCTAATAAAACCATGACAGATAAGAAGCCGCCACTGAATCCTTCAAAACTGAGACTGCCACTTAGAAGAATAACTAATTTCTTGCCTCCACCATCTCCTCTAACATCAAAAAAATATGCCACTTTCAAGAATGGAAAGGAAAACTCGGCCAGAAGGACCTCAATGACAACAAATGCAGAAGCCTTTGCGAAACCAAGAAGCAGGACATCCATTGCTATGAGACCACAGCCTGTACCATCAACTAGGCAGGTCTTTCAGCCAAGGAGGCGGGTCTCCATTGCCACACCATGTCCTGACACAACAACTTCTGACTTAACATCACAGGTCCTTAAGCCAAAGAGGCGGGTCTCCATTGCTACAATCCGTCCTGACACAACTTCTGACTTAACAACTCCACTCCGTACCTCAGCCTCCAGATTTATTGGGGGAAGCAGTGTATCACTTATAAGGAACCAAAGGAAAGATAGGTATTCAAGTTTGTTTGCCCCATTGCCTGAGTTGAGAGCATCAGTTGAGACAACACCAATGTCTGTTAGAAGCAGCAGCAGCAAGTTCAGAAGCAGTCCAACACAGGCAGATTCCAGGGTGGGTAGGCATCCAACTGTCCTTTCACTGCAACGGAGACCTATAGTCTGGAGTCCTCTCAAGCTGAGAGCGGCCTTGAGAAGTAACCGAAAGTCACGGCCTTGA 2394 0.4357 MNDQSTQIQMLAEKFHRFVLDCELKQSSTANRSDNVSKQVNDNDNSDSMDENSLSNGIHETSPDQDHTLPILKKILSLSTKIQDLKKQHIALSNQVKVNLTTESFPGLDVLNSIQLLGTEYELLKRKYLEECSERRRLYNEVIELKGNIRVFCRCRPLNESEIANGSASAVNFESSSDNELQVICSDSSKKQFKFDYVFRPEDNQEAVFSQTKPIVTSVLDGFNVCIFAYGQTGTGKTFTMEGTPEHRGVNYRTLEELFRIAEERHGVMKYELHVSMLEVYNEKIRDLLVENSTQPTKKKLEIKQAAEGTQEVPGLVEARVCGTEDVWELLKTGNRVRSVGSTCANELSSRSHCLLRVTVVGENLINGQKTRSHLWLVDLAGSERVGKTEAEGERLKESQFINKSLSALGDVISALASKSAHIPYRNSKLTHILQSSLGGDCKTLMFVQVSPSATDLGETLCSLNFATRVRGIESGPARKQVDLSELFKYKQMAEKLKHEEKETKKLQDNFQTLQLRLAAKEHHCRNLQEKVRDLENQVAEERKTRLKQESRSLAAVSAQPSSSKHTAANKTMTDKKPPLNPSKLRLPLRRITNFLPPPSPLTSKKYATFKNGKENSARRTSMTTNAEAFAKPRSRTSIAMRPQPVPSTRQVFQPRRRVSIATPCPDTTTSDLTSQVLKPKRRVSIATIRPDTTSDLTTPLRTSASRFIGGSSVSLIRNQRKDRYSSLFAPLPELRASVETTPMSVRSSSSKFRSSPTQADSRVGRHPTVLSLQRRPIVWSPLKLRAALRSNRKSRP 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi549g00024 797 PANTHER KINESIN-LIKE PROTEIN KLP-3 7 615 IPR027640 GO:0003777|GO:0007018
Sebi549g00024 797 FunFam Kinesin-like protein 143 513 - -
Sebi549g00024 797 PRINTS Kinesin heavy chain signature 374 392 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi549g00024 797 PRINTS Kinesin heavy chain signature 423 444 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi549g00024 797 PRINTS Kinesin heavy chain signature 343 360 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi549g00024 797 PRINTS Kinesin heavy chain signature 222 243 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi549g00024 797 MobiDBLite consensus disorder prediction 543 584 - -
Sebi549g00024 797 Pfam Kinesin motor domain 154 473 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi549g00024 797 Coils Coil 490 552 - -
Sebi549g00024 797 ProSiteProfiles Kinesin motor domain profile. 148 473 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi549g00024 797 MobiDBLite consensus disorder prediction 551 577 - -
Sebi549g00024 797 ProSitePatterns Kinesin motor domain signature. 373 384 IPR019821 GO:0003777|GO:0005524|GO:0007018
Sebi549g00024 797 Gene3D Kinesin motor domain 143 516 IPR036961 -
Sebi549g00024 797 SMART kinesin_4 146 481 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi549g00024 797 MobiDBLite consensus disorder prediction 741 766 - -
Sebi549g00024 797 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 510 IPR027417 -
Sebi549g00024 797 CDD KISc_C_terminal 146 474 - -
Sebi549g00024 797 MobiDBLite consensus disorder prediction 30 63 - -
Sebi549g00024 797 MobiDBLite consensus disorder prediction 741 765 - -
Sebi549g00024 797 MobiDBLite consensus disorder prediction 30 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi549g00024 Sebi-Chr549 278680 282606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi549g00024 114 500 Calmodulin-binding Proteins AT5G65930 40.955 3.21e-79 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi549g00024 K10406 - gmx:100788477 1193.33