Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi549g00019 ATGGTACCAAGAAGGAAATCTACTAGTGTGAATAAGCGGTTTTCAAATTCAAATGACTTTTTTCCCGAGAAAGATGGAGTTAACTCAAATATAAACAAGCAACGAAAGAAAAGGTTGACTGATAAATTGGGACCTCAGTGGAGTAAGGAGGAACTAAAGCGATTTTATGAAGCATATAGGAAGTATGGGAAAGAGTGGAAAAAGGTGGCTACCGTTGTATGTGATAGATCCGTTGAAATGGTGGAAGCTCTATACAATATGAATCGGGCATACCTTTCTCTGCCAGAGGGGACAGCTTCTGTTGTTGGCCTCATAGCAATGATGACAGATCATTATAATGTCCTGGAAGGGAGTGATAGTGAAAGGGAGAGCAATGATGCACCAGGATCTCGAAAACCTGTGAAACGAAAGCGTGAAAAAGTTCAGCTAAGTGTTTCAAAAGATCCTGTCCAGTCTCAGTCAATTGCTTCCTCCGATGGTTGCCTCTCTCTACTGAAGAAGAGATGCATTGATGGTATCCAGCCTCGGGTTGTTGGGAAAAGGACACCCCGTGTCCCAGTTTACTACTCTTATAAGAAGGATGATAGGGAAAATTATATTTCACCTAATAAAAGAAGCCTGAAGTCAACTGTTGATGCTAATGATGATGAAGTTGCAAATGTGGCTTTGGCATTAACCAAGGCTGCACAGAGAGGGGGCTCTCCCCTAGTTTGTCAGACACCATACAGAAGAGCAGAGCAACAGTCTTCTCCTGTACCGAGTGGGGAAAAAATGGGCCAAATGTCAGAGACAGCTCATGCCAAGTTTCATGATGTCTCTGTTGATGAAGAGTTTGTGGAAGGCAGTATAGAAAGCAGGGAAACTGAAAATGGAGAATATGCCAGAGATACTAGTTCCTTGATGGACATGGAAGGCATGGGCACTGTTGAGGTTCTTCAGAAGGGGGAAAAATTTTACAGAAAGAAAGAGAGTGTGGGAAATGATGCAAACGATAAGTTTGATGATGGTGGGGAAGCATGTAGTGGCACCGAAGGAGTTAGGTTTAGTTCTTTGAAGGAAAAGGTTTATATTGAGGCTAATAATGAAAAACTTGAGCAATTCTCTCTAAAACATCAGAGGAAAAGAAGCAAGAAACTCTTCTTTGGAGATGAAATTCCTGCCTTGAATGCCTTGCAAACTTTGGCTGATCTGTCTCTAATGATGCCAACATCTAAAGTAGAATCTGTGTTTACTCAGCTCTTCCTCCTTGCCCATCTAGAGTCATCTGTCCAGTTGAAGGGAGAAAGAATGGCTGTTGATAAAGATGATAAGTCTGCCTTACCTGAAGAAACATCAACAAGTCATAACAGATATAAACATAAACTGTGCGTCGTGCCTGGAGTTGAGGCTGCAGCTCCCAAAAAATCTCAACTCAGAAAGGAATCAGGAATTGATACTAATGCTCTGTCTGAATCAAAAGAGAAGCTTCCCCTTGTTGATAGAACATGGAAAAGAAAGCAGAAGTCCATGATTTCAAAGCTCCGGTGGTGCAGGAAGATGACCGGTGGTGGAGGAGGATGGCCAGAGAATGTGGAGGGTGCTCTATCAATGGTGAAGCGGTGA 1602 0.4257 MVPRRKSTSVNKRFSNSNDFFPEKDGVNSNINKQRKKRLTDKLGPQWSKEELKRFYEAYRKYGKEWKKVATVVCDRSVEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVLEGSDSERESNDAPGSRKPVKRKREKVQLSVSKDPVQSQSIASSDGCLSLLKKRCIDGIQPRVVGKRTPRVPVYYSYKKDDRENYISPNKRSLKSTVDANDDEVANVALALTKAAQRGGSPLVCQTPYRRAEQQSSPVPSGEKMGQMSETAHAKFHDVSVDEEFVEGSIESRETENGEYARDTSSLMDMEGMGTVEVLQKGEKFYRKKESVGNDANDKFDDGGEACSGTEGVRFSSLKEKVYIEANNEKLEQFSLKHQRKRSKKLFFGDEIPALNALQTLADLSLMMPTSKVESVFTQLFLLAHLESSVQLKGERMAVDKDDKSALPEETSTSHNRYKHKLCVVPGVEAAAPKKSQLRKESGIDTNALSESKEKLPLVDRTWKRKQKSMISKLRWCRKMTGGGGGWPENVEGALSMVKR 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi549g00019 533 Pfam Myb-like DNA-binding domain 46 82 IPR001005 -
Sebi549g00019 533 SUPERFAMILY Homeodomain-like 45 91 IPR009057 -
Sebi549g00019 533 PANTHER LIN-9 1 505 IPR010561 GO:0006351|GO:0017053
Sebi549g00019 533 ProSiteProfiles SANT domain profile. 42 79 IPR017884 -
Sebi549g00019 533 SMART sant 43 91 IPR001005 -
Sebi549g00019 533 MobiDBLite consensus disorder prediction 116 153 - -
Sebi549g00019 533 MobiDBLite consensus disorder prediction 8 28 - -
Sebi549g00019 533 CDD SANT 47 88 IPR001005 -
Sebi549g00019 533 Gene3D - 5 99 - -
Sebi549g00019 533 MobiDBLite consensus disorder prediction 116 144 - -
Sebi549g00019 533 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi549g00019 Sebi-Chr549 225001 231268 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi549g00019 Myb_DNA-binding 1.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi549g00019 - - gmx:100816217 687.182