Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi548g00041 ATGGAAGAGGTAATTAATTGTATTCGCCGAGCTTGTGAATTAGCTCAAAACCTTGAATCAGACTTACCCAACTTGGCTAACCAGCCTTCTATGCTGTCCTTGTCCATTGATGAGATAGTTGAGACACTGAGTGGTGCCAAAGGAAGGTTATTAAAAATCTACCGACAGGACCAAAAATCAGCATCTTCATCATTTGCTGAAATGGATGCAACAAGTCTAATGCGGGAATGGCTCGGGTGGGGTTATGTTGGTCAGTTGTCTCAAATGCAGCAGCTAATTCAAGTTGTGAGGGGTACCACATCGGGTGATGTGCGGATTGGTGAAATGGGAGGGAGAAATGTGGTGGATTCTGAGAGATTGAAAGCATCTGAAGGAGGGGTGCAGGTGATTGATGTTGAAGCATCACCCTCACGACCACGAAGATTAAGAAACATTGACCTGGAGAAAAATAAAATGATGGTTCCTGCACCCCAGTTTGGCAACAAAGAAATGCCGCCAGAGGATGGCTTCACTTGGAGAAAATATGGCCAGAAACAGATACTTGGCTCCAAGTACCCAAGGTATCGTTAA 570 0.4474 MEEVINCIRRACELAQNLESDLPNLANQPSMLSLSIDEIVETLSGAKGRLLKIYRQDQKSASSSFAEMDATSLMREWLGWGYVGQLSQMQQLIQVVRGTTSGDVRIGEMGGRNVVDSERLKASEGGVQVIDVEASPSRPRRLRNIDLEKNKMMVPAPQFGNKEMPPEDGFTWRKYGQKQILGSKYPRYR 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi548g00041 189 Gene3D WRKY domain 148 189 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi548g00041 189 ProSiteProfiles WRKY domain profile. 167 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi548g00041 189 Pfam WRKY DNA -binding domain 167 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi548g00041 189 Coils Coil 8 28 - -
Sebi548g00041 189 SUPERFAMILY WRKY DNA-binding domain 164 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi548g00041 189 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 75 187 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi548g00041 Sebi-Chr548 589412 591853 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi548g00041 1 187 WRKY Transcription Factor Family AT2G40740 31.343 2.71e-18 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi548g00041 WRKY 4.8e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi548g00041 - - gmx:100792150 205.297