Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi548g00040 ATGAGTATTCTTTTCCCTGAAAGTGTCTCAGAGAAGAGAAAAAGAATCATTAAAGAGCTGGTTCAGGGGCAGGAGTATGCTACTCAGCTCAAGTTTCTGCTTCAGAAGCCTATTGACTCTGATGGGTCTCCTTCAGCAAAAGAATTGGTGGCCAATGTGTTGAGATCTTTCACTGAGACACTTTCTGTTATGACTACTTCTTCTGAAGCTGCTGGTGATGAAGTTGCTGATCAGAATATTGCCGATTCCGGTGAAGATGGGACTTCAAGCAATGATATTCCTCTAAGGTCTGAAGATTCAACTGAAAGTAGGAAGAGATTGTTGCCGTCAGAAACCAACAAGGATCGCAGAGGTTCCTATAAAAGAAGGAAGACTGAACAGACAGTATCCATAGTCTCCCAAACAACTGATGATAATCATGCCTGGAGAAAGTACGGACAGAAGGAGATCCTTAATTCTCAATTCCCCAGGAGTTACTTCAGGTGCACTCGGAAATATGACCAAGGTTGCCGGGCAACCAAACAGGTGCAAAGGGTACAAGAGAATCCAAACATGTACCAAATTACATATATTGGATTTCACACATGCAAAGACACTCTAAAGGCTCCACAAATGGTCAAATATTCTGATACTTGGGATTCATTCCTTGTGAATTCCCATCATGGTGATGAGTCAAAGGTGCCAAATCTACAAGCTCCCCCTATTAGCCCAACTGTAAAACAAGAATATCCCAACGATGATACAGACAACCTGTGGTCTGATTTGAAGGATTTTGAACTATCCAAGCCTGCCATTGTACCTTCTGATAATGTAGATACTGTGTATTCATGTACTGGATCTCAAAATCTGGACATGGATTTTGGGGTATTTTCTTCTCATCATTTCACCACCGATTTCCACTTTGATGATGAAAGTCATTTGCTTTATAGTTAG 933 0.4126 MSILFPESVSEKRKRIIKELVQGQEYATQLKFLLQKPIDSDGSPSAKELVANVLRSFTETLSVMTTSSEAAGDEVADQNIADSGEDGTSSNDIPLRSEDSTESRKRLLPSETNKDRRGSYKRRKTEQTVSIVSQTTDDNHAWRKYGQKEILNSQFPRSYFRCTRKYDQGCRATKQVQRVQENPNMYQITYIGFHTCKDTLKAPQMVKYSDTWDSFLVNSHHGDESKVPNLQAPPISPTVKQEYPNDDTDNLWSDLKDFELSKPAIVPSDNVDTVYSCTGSQNLDMDFGVFSSHHFTTDFHFDDESHLLYS 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi548g00040 310 SUPERFAMILY WRKY DNA-binding domain 134 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi548g00040 310 Gene3D WRKY domain 121 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi548g00040 310 SMART WRKY_cls 136 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi548g00040 310 Pfam WRKY DNA -binding domain 137 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi548g00040 310 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 20 219 IPR044810 GO:0003700
Sebi548g00040 310 MobiDBLite consensus disorder prediction 68 132 - -
Sebi548g00040 310 ProSiteProfiles WRKY domain profile. 137 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi548g00040 310 MobiDBLite consensus disorder prediction 223 244 - -
Sebi548g00040 310 MobiDBLite consensus disorder prediction 97 124 - -
Sebi548g00040 310 MobiDBLite consensus disorder prediction 82 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi548g00040 Sebi-Chr548 576508 578264 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi548g00040 12 301 WRKY Transcription Factor Family AT3G56400 37.049 8.21e-51 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi548g00040 WRKY 2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi548g00040 - - gmx:100170683 392.889