Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi548g00026 ATGACCATGATTCATCGCACGCGGTTTCGGGGTCAGTGCGGTTCTGGTTCTGGTGGTGCAACTGAGGATGTTACGCGAGGCACCGTTGGAAATGGAGAGCAAGAGGGGAGTTCCTCGTCGCGGAATCCGGCTGGGGTTGGGACAGTGACGATGGAGGAGGCTGAGGATATGGTTCCTCTGGGTGAGGTGCCTTTGGATGATGTTCTTGGACTTGGTCACGGTAGGGGCAACTATAGCTCTGGTGTTCAGCAGGTTGCAAAGTGGATGGAGCAGATTATCCCTTTCTCCCTCTTGCTGTTCATTGTCATCGTCCGCCAGCATTGGAAAGGCTTCTTTGTCACAACCTGTGTATCAGCTGTGATGTTCATGTCAAATGAATTTGTTAAGAAACAGACAGCTCTAAAGGGAGATCGGAAAGTCTCTGTTCTTCTTGGTATCTCTTTTGTCTTCATGCTGTATGTGATATGCATTTACTGGTGGTATCGAAATGATGATCTTTTATACCAACTGGCCATGTTTCCACCAAAAGCAACACCACCTTTCTGGCATACAATATTTATCATTTTGGTTAATGATGCATTGATGCGGCAAGCAGCAATGGCTTTCAAGTGTTTGTTGCTTATTTACTACAAAAATAGAGGAGGCCAGAACTTCGGACAGCAGGGTCAAATGTTAACTTTGGTTGAGTATACTCTACTATTATATCGTGCTTTGTTGCCAACACCAGTTTGGTGCCGATTTCTCTTGAACAAGGATTCTGGAAGTCTCTTTTCATCAGTGACCACAGTATTGTATGTAACTTTGAAGCTGATATTTGTAGTTGACAAGGTCCATTGCTTCCTTCGATCCTTAAAAGCATTATCAAAAAAGGAAGTTCATTATGGGGTTTATGCAACCATGGAACAGGATGGAGGACATCCAATAGGGATGCATAACCACACATGTAAGATGTAA 954 0.4434 MTMIHRTRFRGQCGSGSGGATEDVTRGTVGNGEQEGSSSSRNPAGVGTVTMEEAEDMVPLGEVPLDDVLGLGHGRGNYSSGVQQVAKWMEQIIPFSLLLFIVIVRQHWKGFFVTTCVSAVMFMSNEFVKKQTALKGDRKVSVLLGISFVFMLYVICIYWWYRNDDLLYQLAMFPPKATPPFWHTIFIILVNDALMRQAAMAFKCLLLIYYKNRGGQNFGQQGQMLTLVEYTLLLYRALLPTPVWCRFLLNKDSGSLFSSVTTVLYVTLKLIFVVDKVHCFLRSLKALSKKEVHYGVYATMEQDGGHPIGMHNHTCKM 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi548g00026 317 MobiDBLite consensus disorder prediction 18 46 - -
Sebi548g00026 317 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 58 302 IPR044235 GO:0061630|GO:1904294
Sebi548g00026 317 MobiDBLite consensus disorder prediction 1 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi548g00026 Sebi-Chr548 370243 377541 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi548g00026 16 302 C3H Transcription Factor Family AT5G01960 53.667 3.19e-109 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi548g00026 - K22379 aprc:113864793 378.252