Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi548g00014 ATGGAGGAGGTTTTTCTAGCAATGAAAGTGGTTTCTTCATTTGCTCTTGCGGCCATTTTGAGCTGGATGCTTTATGTGTATGGTAATCTATGGCATAAATCCCAAAGGGTCAGAAGGAAGCTCCGAATGCAAGGAATCAGAGGGCCTCCACCTTCTTTTCTACACGGAAATCTACCTGATATGCAGAGAATCCAATCACAGGCTGCAAAAACTCCCACTTTCACCCATTCTGATCAGTTTCTAGCTCATGACTACACTGCATCACTCTTCCCATATTTTGAACACTGGAGAAAACAATACGGTCTACTGTACACTTACTCTACAGGGATGAAGCAACACCTGTATGTGAACCAACCGGATCTAGTGAGAGAAATGAACCAGTGTATCACTTTGGATTTGGGCAAGCCTTCTTATGTAACAAACAAACTTGCACCCCTTCTTGGCAATGGCATTTTGAGAGCCAATGGACTTAGTTGGGCACAACAGAGGAAGCTTGTTGCAGCTGAGTTCTTTATGGACAAAGTTAAGGGTATGGTGGGCCTAATGATAGAGTCAGCACAACCTTTGCTACTAAAATGGGAGCAATGTATTGAGGACCAAGGAGGCGGTGCCGCTGCTGAAGTTAAAGTTGATGCAGATTTGAGGGGCTTCTCAGCTGATGTTATTTCCATGGTTTGTTTTGGCCATTCTTATTCCAAGGGAAAGGAAGTTTTCTCAAAGCTTAGAACCATCCAGAAGATCATGTCCAAGCAAGGTGGCTTCCTTTTTGGGGTCAGCGGTTTCCGTGACAAACTAAATTTTTGGACAAAGAAGCAAAATGAGATTACCAGTTTGGAGAGAGAGATAGAGTCATTGATCTGGGAGTTAGTGGAGGAACGAAAGAGAGAATGCTCAGAGACATCCTCATCAGAAAAGGATCTAATGCAGTTACTTCTGGAAGCAGCTATGACTGATCAAAGTCTGGGGAAGGACTTTTCCAAGCGATTCATTGTGGATAATTGCAAAAACATATACTTTGCTGGCCATGAAACTACTGCTGTTGCAGCCTCTTGGTGTTTGATGCTTCTTGCTTTGCACCCAGAATGGCAAGCTCGTATAAGAACAGAGGTGGCTGAACATTGCCCCAATGGCATCCCAGATGCAGATTCTCTCCCTCTCTTGAAAACGGTTACTATGGTGATTCAAGAAGTGCTACGTTTATACCCACCAGCAGCCTTTGTGTCAAGGGAGGCATATAGAGATATCCAAATTGGAGACCTTGTAGTTCCTAAAGGTGTTTGTTTATGGACTCTGATCCCAACATTGCACAGAGATCCTGAAATTTGGGGACCAGATGCTAATGAATTTAAACCAGAAAGGTTCAGTGAGGGTGTCTCTAAGGCTTGCAAGTATCCACAAGCGTATGTGCCATTTGGGGTAGGTAATCGCTTGTGCTTGGGGAAGAACTTTGCAATGGTTGAATTGAAGGTTGTGTTGGCACTAATCATCTCCAAGTTCAGCTTCTCTTTATCTCCTAGTTATAGGCATTCTCCGGCATATAGAATGATTGTAGAGCCAGGACATGGTGTGTATATTATTATTCAGAAGATTTGA 1593 0.4338 MEEVFLAMKVVSSFALAAILSWMLYVYGNLWHKSQRVRRKLRMQGIRGPPPSFLHGNLPDMQRIQSQAAKTPTFTHSDQFLAHDYTASLFPYFEHWRKQYGLLYTYSTGMKQHLYVNQPDLVREMNQCITLDLGKPSYVTNKLAPLLGNGILRANGLSWAQQRKLVAAEFFMDKVKGMVGLMIESAQPLLLKWEQCIEDQGGGAAAEVKVDADLRGFSADVISMVCFGHSYSKGKEVFSKLRTIQKIMSKQGGFLFGVSGFRDKLNFWTKKQNEITSLEREIESLIWELVEERKRECSETSSSEKDLMQLLLEAAMTDQSLGKDFSKRFIVDNCKNIYFAGHETTAVAASWCLMLLALHPEWQARIRTEVAEHCPNGIPDADSLPLLKTVTMVIQEVLRLYPPAAFVSREAYRDIQIGDLVVPKGVCLWTLIPTLHRDPEIWGPDANEFKPERFSEGVSKACKYPQAYVPFGVGNRLCLGKNFAMVELKVVLALIISKFSFSLSPSYRHSPAYRMIVEPGHGVYIIIQKI 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi548g00014 530 Gene3D Cytochrome P450 30 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi548g00014 530 PANTHER CYTOCHROME P450 FAMILY MEMBER 27 522 - -
Sebi548g00014 530 PRINTS P450 superfamily signature 392 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi548g00014 530 PRINTS P450 superfamily signature 469 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi548g00014 530 PRINTS P450 superfamily signature 478 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi548g00014 530 PRINTS P450 superfamily signature 340 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi548g00014 530 Coils Coil 275 295 - -
Sebi548g00014 530 SUPERFAMILY Cytochrome P450 84 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi548g00014 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 471 480 IPR017972 GO:0005506|GO:0016705
Sebi548g00014 530 Pfam Cytochrome P450 87 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi548g00014 530 PRINTS E-class P450 group I signature 468 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi548g00014 530 PRINTS E-class P450 group I signature 97 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi548g00014 530 PRINTS E-class P450 group I signature 478 501 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi548g00014 530 PRINTS E-class P450 group I signature 349 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi548g00014 530 PRINTS E-class P450 group I signature 329 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi548g00014 530 PRINTS E-class P450 group I signature 217 235 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi548g00014 Sebi-Chr548 265491 271489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi548g00014 121 525 Cytochrome P450 AT5G24900 59.268 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi548g00014 K20661 - gmx:100815776 947.577