Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi547g00017 ATGTCTGTCCCTTCTTCTGCTTCAACTTCTTTTCCATTTCTATTCTGTTCTTTGTTTGTTTTCTTCATTTTGACTGTAACTTCACCATGCTTAGCCATACTTAACAAAACTAACCGCACCCCTCGCCAGCTCTCAGTTGATTACTATGCCAAATCTTGCCCCCAGGTAGAACAGCTTGTTGGCTCAATCACCTCTCAACAATTCAAAGAATCACCTGTTTCTGGCCCTGCTACCATTCGCCTCCTCTTCCATGATTGCTTTGTAGAAGGTTGTGATGCTTCAATTTTAATAGAATCAAAGCCTGGGAGCAAGGAGTTGGCAGAGAAAGATGCAGAGGATAATAGAGATTTGAGAGTGGAAGGTTTTGAGACCATAAGGAAGGCTAAGGAGGTAGTGGAGAGAAAGTGCCCAGGTGTTGTGTCCTGTGCAGACATTCTTGCAATTGCAGCCAGAGATTATGTACACCTGGCAGGAGGGCCCTATTACCAAGTGAAGAAGGGAAGATGGGATGGAAAGATATCAATGGCATCAAGAGTGGGGTCCAACATCCCTCGTGCAAACTCCACCATTGATCAACTCATCAAACTCTTCAACTCAAAGGGCTTAACCATACAAGACATGGTTGCACTTTCTGGTGCCCACACAATTGGGTTTGCCCATTGCAAGAACTTTGTGACCCGTCTCTACAATTACCAGGGCAAGGGTCAACCCGACCCAAATATGGACCCCAAACTGCTACATGCTTTGAGATTGTATTGTCCAAACTATGGTGGAAACTCAGACATTGTTGCCCCATTTGATGCTACTACCCCCTTTCATATTTGA 825 0.4473 MSVPSSASTSFPFLFCSLFVFFILTVTSPCLAILNKTNRTPRQLSVDYYAKSCPQVEQLVGSITSQQFKESPVSGPATIRLLFHDCFVEGCDASILIESKPGSKELAEKDAEDNRDLRVEGFETIRKAKEVVERKCPGVVSCADILAIAARDYVHLAGGPYYQVKKGRWDGKISMASRVGSNIPRANSTIDQLIKLFNSKGLTIQDMVALSGAHTIGFAHCKNFVTRLYNYQGKGQPDPNMDPKLLHALRLYCPNYGGNSDIVAPFDATTPFHI 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi547g00017 274 CDD secretory_peroxidase 43 272 IPR033905 GO:0004601|GO:0042744
Sebi547g00017 274 PANTHER - 31 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi547g00017 274 ProSitePatterns Peroxidases proximal heme-ligand signature. 206 216 IPR019793 -
Sebi547g00017 274 ProSitePatterns Peroxidases active site signature. 75 86 IPR019794 GO:0004601
Sebi547g00017 274 FunFam Peroxidase 184 274 - -
Sebi547g00017 274 PRINTS Haem peroxidase superfamily signature 75 89 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi547g00017 274 PRINTS Haem peroxidase superfamily signature 140 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi547g00017 274 PRINTS Haem peroxidase superfamily signature 206 221 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi547g00017 274 PRINTS Haem peroxidase superfamily signature 158 170 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi547g00017 274 PRINTS Plant peroxidase signature 158 173 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi547g00017 274 PRINTS Plant peroxidase signature 77 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi547g00017 274 PRINTS Plant peroxidase signature 139 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi547g00017 274 PRINTS Plant peroxidase signature 53 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi547g00017 274 PRINTS Plant peroxidase signature 120 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi547g00017 274 PRINTS Plant peroxidase signature 205 217 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi547g00017 274 Gene3D - 47 183 - -
Sebi547g00017 274 FunFam Peroxidase 47 193 - -
Sebi547g00017 274 Gene3D Peroxidase, domain 2 184 272 - -
Sebi547g00017 274 Pfam Peroxidase 64 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi547g00017 274 ProSiteProfiles Plant heme peroxidase family profile. 43 274 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi547g00017 274 SUPERFAMILY Heme-dependent peroxidases 43 269 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi547g00017 Sebi-Chr547 668067 670730 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi547g00017 17 272 Peroxidase AT2G34060 63.985 1.05e-124 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi547g00017 K00430 - gmx:100777463 465.692