Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi547g00010 ATGGGTTCAGGAGATTGGTTTAAGACAATAATTAGCTTAAGAAAATCAAAAGGAGGCAGATCAAAAAAAGCAAAGGGATCTTTAGCTACAGAGAAATTAAGTGCATTGAAGACTGATAATTATACAGGAAAAGAGTCCAGTGGTTTAGCAAATGGCATTAAAAGTGAAAATCTTGAGTCAGATGAGGTATTAGTTGAAACTATTGCTGCTACAAGAATACAAACAGCATTCCGGGCCTACAAGGCCAGAAAATCTTTACATCGCTTGAAAGGATTCACAAAACTGAAGAACCTGACTGAAGACAGGATCAAGCAGAAGAAACTACATTCTCAACTAAAACTTGAGGCAAAGCTTCATGACCTAGAGGTAGCCTTCATGGCATTTCAGTGTGCCAACTTGTGGAATGGTGTGGTGGTTCTGAGACCATGGAGGAAATCCTCGCAAGGTTACATCATAGAGAAGAAGCAGCTGTCAAGAGGGAAAGAGCCATGGCATATGCCTTCTCACATCAGTGGAGGGCCCAACTCTAGTCAAAGCCAAGGGCTAGGTAATTATGAACTCAACAAAACTGGTTGGGGTTGGAGCTGGAAGGAACGCTGGATTGCTGCACGTCCATGGGAAAGTCGAGTCCCTAGTATAACCATTAGCCCCAAGAAAGCTCAAAATATGCAATCAGGCAAAGTTCAGAAGGATAAGAACCCCATCAACACCAAAAGAATCAGCTTCAGTTAA 732 0.4208 MGSGDWFKTIISLRKSKGGRSKKAKGSLATEKLSALKTDNYTGKESSGLANGIKSENLESDEVLVETIAATRIQTAFRAYKARKSLHRLKGFTKLKNLTEDRIKQKKLHSQLKLEAKLHDLEVAFMAFQCANLWNGVVVLRPWRKSSQGYIIEKKQLSRGKEPWHMPSHISGGPNSSQSQGLGNYELNKTGWGWSWKERWIAARPWESRVPSITISPKKAQNMQSGKVQKDKNPINTKRISFS 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi547g00010 243 PANTHER IQ-DOMAIN 5-RELATED 1 223 - -
Sebi547g00010 243 Pfam IQ calmodulin-binding motif 69 86 IPR000048 GO:0005515
Sebi547g00010 243 MobiDBLite consensus disorder prediction 161 182 - -
Sebi547g00010 243 ProSiteProfiles IQ motif profile. 66 94 IPR000048 GO:0005515
Sebi547g00010 243 MobiDBLite consensus disorder prediction 218 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi547g00010 Sebi-Chr547 314699 317337 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi547g00010 1 243 IQD Protein Family AT2G33990 34.532 2.93e-29 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi547g00010 - - vun:114186748 241.891