Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi546g00019 ATGAGGACATCTTCTTTTACTGACATGCTCTCCAACAACAACAGTAACATGACTTTGGAGGATCATAATTGGGGAACTTCTTCTGAACTTAATCATCAAGTTGGACTTGATGTTCCCAAATTCAAGTCTGTTCAACCTCCTTTACTGCCCCTCTCTCCCTCACCAATTTCCCCTTCTTCTTACTTAGCCTTTTCATCTGGTTTTAGCCCATCTGAGTTCTTGAACTCATCTTTATTTTTGCATCGCCTACTACGGAGACTTTTGCTGGCGAGAGCTTTAAACTGGAAGAACAGTTCAGGTGAGGAACAACAAAAGGAGGATGAGAAAAACTACTCTGACTTCTCTTTCCAAACACAAGCAAAGCCTGCACCTGTCTTTCAATCTTCCTCAAACATGTTTCAAGTGGAACCACTTAAGAAACAAGACATATGGAAATTCAATGAACCTACAAAGAAAACTGTTTTTTCATCAACAAAATCTGAATATCCATCAACTCAGAGCTTTTCCTCAGAAATGGCACCAAGCAAACCAGAAATACAAAATAATTCAGTTTCTGGGTCTGGCCAGTTTAACTACACTAATGCATCTCAGTCTGTTAGAGAACAAAGGAGATCAGAAGATGGGTACAACTGGAGAAAATATGGACAGAAACAGGTAAAAGGAAGCGAAAATCCACGCAGTTATTACAAATGCACACACCCAAATTGCTCAATGAGGAAGAAAGTTGAGAGATCTTTGGATGGTCAAATTACTGAAATAGTATATAAGGGAAATCATAACCACCCCAAACCCCAGTCTACTAGAAGATCTAGCTCTCAACCAATTCATCAACCTTCTTCATCCTGCACCAACTCAGGGATTTCTGATCAATCAGTGGTGACCCTAGGCAATCCACAAATGGAGCCTGTCTCTATACAAGAAGATTCTTCAGCTTCTGTGGGAGAGGAAGACTTCGAACAAACATCACAAACTACTTATTCTGGAGGAGATGAAGATGACCTTGGACCAGAGGCCAAAAGATGGAAGGGAGATAATGACTATGATGGCTATTCAGCCTCAGATAGTAGAACTGTTAGAGAGCCTAGAGTTGTGGTTCAAACTACAAGTGAAATTGATATACTTGATGATGGCTATAGGTGGAGGAAATATGGACAGAAAGTAGTTAAAGGAAACCCAAATGCAAGGAGCTATTACAAATGCACAGCCCCTGGTTGTTCAGTGAGGAAACATATTGAGCGAGCGGCACATGATATCAAAGCTGTGATCACGACTTATGAAGGGAAACACAACCATGATTTACCTGCTGCACGTGGTAGTGCAGGTTATAACATGAACAGAAATTCTCTGAACAGCAACACCAGCAATGTACCAGCACCTATAAGGCCCTCAGCAGTGAACCGTTATTCTAGCTCATCTAGTTTGACAAGTTCACTTTACAATACTAGGCTTCCAACAACTGGAAATCAAGAATCATTTCCACTGGACATGTTGCAGAGTCCTGGAAATTTGGGGTATTCAGCTCTTGGCAGATCAATGGGTTCATATACCAATCATGCACAATACTCAGATGCAGCATACTCAAAGGCCAAGGAAGAGAGGAATGATGACTCATTCCTTCAGTCATTTCTGTCAAAGGACTTCTAA 1644 0.4106 MRTSSFTDMLSNNNSNMTLEDHNWGTSSELNHQVGLDVPKFKSVQPPLLPLSPSPISPSSYLAFSSGFSPSEFLNSSLFLHRLLRRLLLARALNWKNSSGEEQQKEDEKNYSDFSFQTQAKPAPVFQSSSNMFQVEPLKKQDIWKFNEPTKKTVFSSTKSEYPSTQSFSSEMAPSKPEIQNNSVSGSGQFNYTNASQSVREQRRSEDGYNWRKYGQKQVKGSENPRSYYKCTHPNCSMRKKVERSLDGQITEIVYKGNHNHPKPQSTRRSSSQPIHQPSSSCTNSGISDQSVVTLGNPQMEPVSIQEDSSASVGEEDFEQTSQTTYSGGDEDDLGPEAKRWKGDNDYDGYSASDSRTVREPRVVVQTTSEIDILDDGYRWRKYGQKVVKGNPNARSYYKCTAPGCSVRKHIERAAHDIKAVITTYEGKHNHDLPAARGSAGYNMNRNSLNSNTSNVPAPIRPSAVNRYSSSSSLTSSLYNTRLPTTGNQESFPLDMLQSPGNLGYSALGRSMGSYTNHAQYSDAAYSKAKEERNDDSFLQSFLSKDF 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi546g00019 547 MobiDBLite consensus disorder prediction 260 329 - -
Sebi546g00019 547 MobiDBLite consensus disorder prediction 332 354 - -
Sebi546g00019 547 ProSiteProfiles WRKY domain profile. 369 434 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi546g00019 547 SUPERFAMILY WRKY DNA-binding domain 201 264 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi546g00019 547 SMART WRKY_cls 374 433 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi546g00019 547 SMART WRKY_cls 205 263 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi546g00019 547 ProSiteProfiles WRKY domain profile. 200 264 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi546g00019 547 Gene3D WRKY domain 361 427 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi546g00019 547 Pfam WRKY DNA -binding domain 206 262 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi546g00019 547 Pfam WRKY DNA -binding domain 375 431 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi546g00019 547 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 114 453 IPR044810 GO:0003700
Sebi546g00019 547 MobiDBLite consensus disorder prediction 255 354 - -
Sebi546g00019 547 MobiDBLite consensus disorder prediction 1 24 - -
Sebi546g00019 547 MobiDBLite consensus disorder prediction 157 233 - -
Sebi546g00019 547 SUPERFAMILY WRKY DNA-binding domain 366 434 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi546g00019 547 MobiDBLite consensus disorder prediction 157 199 - -
Sebi546g00019 547 Gene3D WRKY domain 191 265 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi546g00019 547 FunFam WRKY transcription factor 194 265 - -
Sebi546g00019 547 FunFam WRKY transcription factor 33 361 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi546g00019 Sebi-Chr546 350238 352759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi546g00019 36 543 WRKY Transcription Factor Family AT2G38470 45.113 1.16e-112 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi546g00019 WRKY 3.1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi546g00019 K13424 - gmx:100776837 787.334