Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi543g00026 ATGGCATCCAACAGGGGTCAAGGTGGAATTCAGCAGTTGTTGGCTGCTGAACAAGAAGCACAACGGATTGTAAATGCTGCAAAAGCTGAAAAATTGGCTAGGTTGAAACAGGCCAAAGAAGAGGCTGAAAAGGAGGTTACTGAATACCGGGCTAAGCTAGAGCTTGAGTTTCAAAAGAAAGTTTCAGATAGTAGCGGAGATTCTGGAGCTAATGTCAAGCGACTTGAGGTAGAGACTGAAGCAAAAATCCATCACCTGAAAAAGGAGGCTGCAAGGATATCGGATGATGTTGTCGCCATGCTCCTTAAATATTATGGTGCGGATAAGGTCATTGTTTAG 339 0.4395 MASNRGQGGIQQLLAAEQEAQRIVNAAKAEKLARLKQAKEEAEKEVTEYRAKLELEFQKKVSDSSGDSGANVKRLEVETEAKIHHLKKEAARISDDVVAMLLKYYGADKVIV 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi543g00026 112 Pfam Vacuolar (H+)-ATPase G subunit 7 104 IPR005124 GO:0016471|GO:0046961|GO:1902600
Sebi543g00026 112 Gene3D - 1 107 - -
Sebi543g00026 112 Coils Coil 10 59 - -
Sebi543g00026 112 NCBIfam V-type ATPase subunit G 3 103 IPR005124 GO:0016471|GO:0046961|GO:1902600
Sebi543g00026 112 FunFam V-type proton ATPase subunit G 3 110 - -
Sebi543g00026 112 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 104 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi543g00026 Sebi-Chr543 313836 316605 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi543g00026 1 104 Primary Pumps ATPases(2) AT3G01390 71.154 1.41e-39 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi543g00026 K02152 - gmx:100306550 176.792