Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi543g00019 ATGAGCGTCATCGACATTCTAACCAGAGTTGATACCATTTGCAAGAAGTACGACAAATACGATGTCGAAAAGCACAAGGATTCCAATCTCGCCGGCGACGATGCCTTTGCCAGACTCTACGCCAGTGTCGACGCCGACATTGAGGCCCTGCTTCAGAAAGCAGAAACCGCTTCCAAGGACAAAGGTAGGGCTTCTGCTGTAGCGATCAATGCGGAGATTCGTCGTACCAAAGCTCGGTTGCTGGAGGAGGTCCCCAAGTTACAGAAGTTGGCTATGAAAAAGGTAAAAGGGCTTTCATCGCAAGAATTTGCTGCCCGTAATGATTTGGTTCTTGCATTGCCAGACAGAATCCAAGCTATCCCAGATGGGACTCCTGCTGCACCAAAACAAACTGGAGGCTGGGCAACTTCTGCCTCACGTGCTGAAATTAAATTTGACTCAGATGGGCGATTTGACGATGAATACTTCCAACAAACTGAGGAGTCAAGTCGATTCAGGCAAGAATATGAAATGCGTAGAATAAAACAGGCAAAAGGATTGGATACATTGAAAAACATGGCATCTGATATGAATGAGGAACTGGATAGACAAGTTCCACTGATGGATGAGATTGACACTAAGGTGGACAAGGCATCCTCTGACCTTAAGAATACCAATGTTAGACTTAGAGACACAGTAAACCAGGTTATTTAA 693 0.4545 MSVIDILTRVDTICKKYDKYDVEKHKDSNLAGDDAFARLYASVDADIEALLQKAETASKDKGRASAVAINAEIRRTKARLLEEVPKLQKLAMKKVKGLSSQEFAARNDLVLALPDRIQAIPDGTPAAPKQTGGWATSASRAEIKFDSDGRFDDEYFQQTEESSRFRQEYEMRRIKQAKGLDTLKNMASDMNEELDRQVPLMDEIDTKVDKASSDLKNTNVRLRDTVNQVI 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi543g00019 230 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 180 225 IPR000727 -
Sebi543g00019 230 PANTHER SYNTAXIN 45 224 IPR045242 -
Sebi543g00019 230 CDD SNARE_Qc 177 223 - -
Sebi543g00019 230 SUPERFAMILY SNARE fusion complex 178 223 - -
Sebi543g00019 230 Gene3D - 173 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi543g00019 Sebi-Chr543 188293 189980 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi543g00019 1 229 SNARE and Associated Proteins AT3G09740 71.429 9.59e-125 352