Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi543g00018 ATGGCTTCCCAAAACCCACCGGAGGAAGAAAACTCAAAGCGGAATTGGTCCCTCAAAGACTTTGAGATCGGTAAACCTCTCGGAAAAGGAAAATTTGGCCGAGTCTACGTCGCCAGAGAAGTCAAGAGCAAATATGTTGTGGCATTGAAGGTTATTTTTAAGGAACAAATTGAAAAGTACAAGATTCACCATCAACTGAGGAGAGAGATGGAGATACAAAGCAGTCTTCGCCACCCAAACATCCTGAGGCTCTATGGCTGGTTTCATGATGCTGATCGGGTTTTCTTGATTCTTGAGTATGCTCATAATGGTGAGCTTTATAGGGAACTAAGAAAAAAGGGGCATCTCACTGAGAAGCAAGCTGCCACGTATATTCTGAGCCTCACAAGGGCGTTGGCTTATTGTCATGAGAAGCATGTTATTCATAGGGATATCAAGCCTGAAAATTTGTTACTTGACCATGAGTCTAGAAGCAAAAGACATACCATGTGTGGAACATTGGATTATCTAGCACCAGAAATGGTTGAAAACAAAGCTCATGACTACGCAGTTGATAACTGGACTCTAGGTATTCTATGCTTTGAGTTCCTCTATGGCGTTCCTCCATTTGAGGCTGAGAGTCAAGTTGATACCTTCAAAAGGATAATGAAGGTTGACCTAAGCTTCCCTCACACTCCTCCTGTTTCTTCAGATGCCAAAAATCTGATTAGTCGGCTCTTGGTAAAAGACTCCTCACGAAGGCTCTCTCTTCAAAAGATAATTGAACATCCTTGGATAGTCAAGAATGCAAATCCGATGGGTATCTGCAAGTAG 813 0.4256 MASQNPPEEENSKRNWSLKDFEIGKPLGKGKFGRVYVAREVKSKYVVALKVIFKEQIEKYKIHHQLRREMEIQSSLRHPNILRLYGWFHDADRVFLILEYAHNGELYRELRKKGHLTEKQAATYILSLTRALAYCHEKHVIHRDIKPENLLLDHESRSKRHTMCGTLDYLAPEMVENKAHDYAVDNWTLGILCFEFLYGVPPFEAESQVDTFKRIMKVDLSFPHTPPVSSDAKNLISRLLVKDSSRRLSLQKIIEHPWIVKNANPMGICK 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi543g00018 270 FunFam Aurora kinase A 13 104 - -
Sebi543g00018 270 FunFam Serine/threonine-protein kinase ark1 13 268 - -
Sebi543g00018 270 Gene3D Phosphorylase Kinase; domain 1 9 104 - -
Sebi543g00018 270 SMART serkin_6 21 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi543g00018 270 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Sebi543g00018 270 PIRSF ILK 1 261 - -
Sebi543g00018 270 SUPERFAMILY Protein kinase-like (PK-like) 14 263 IPR011009 -
Sebi543g00018 270 Gene3D Transferase(Phosphotransferase) domain 1 105 267 - -
Sebi543g00018 270 ProSitePatterns Protein kinases ATP-binding region signature. 27 54 IPR017441 GO:0005524
Sebi543g00018 270 CDD STKc_Aurora 20 260 - -
Sebi543g00018 270 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 8 268 IPR030616 GO:0004672
Sebi543g00018 270 Pfam Protein kinase domain 21 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi543g00018 270 ProSiteProfiles Protein kinase domain profile. 21 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi543g00018 Sebi-Chr543 181104 183856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi543g00018 4 264 CBL-interacting serine-threonine protein kinases AT5G25110 36.525 1.32e-56 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Sebi543g00018 Pkinase 1.4e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi543g00018 K08850 - gmx:100800111 498.819