Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi543g00017 ATGGCTGCAAATTTAAAGCCACGTTTTAATACATGTTCCCTCTTTCTATTGCTTCTCTTGCATTTTAATTTGGGTAGAAGCCAACTTGAGGTGAACTATTACTCAGACACGTGTCCAAAAGCGGAAGAGATAATCAAGCAACAAGTCATCGAGCTATACAACAAGCATGGAAACACAGCCGTTTCATGGGTTAGAAATCTCTTTCATGATTGTGTAGTCAAGTCATGCGATGCATCCCTACTGTTAGCGACGGTGGGCGATGTAGTGTCGGAGCAGACATCGGAGAGAAGTTTTGGGATGAGAAACTTCAAGTACATCAACACCATCAAAGCCGCCCTTGAGAGAGAATGCCCCTTGACAGTTTCATGTGCTGACATTGTTGCTCTTTCTGCTAGAGATGGCATTGTCATGTTGGGAGGTCCAAGGATCGAAATGAAGACAGGGCGAAAGGATAGCAAAGAAAGCTATACAACGGTGCTGGAAAACTTCATTCCCAATCACAATGACTCCATTTCCTTAGTGCTTTCTCGTTTTCAAGCCATTGGCATTGACACTCAAGCCACAGTCGCTCTTTTAGGAGCACACTCGGTGGGAAGAGTTCATTGCATGAATCTGGTGCACAGGCTATACCCCACAGTGGATGAAACTCTGGACCCTGCACATGCAGAGTACCTGAAACGACGGTGCCCAACACCGAATCCGGATCCAAAGGCTGTGTTATATGCGAGGAATGACCTGAAAACGCCGATGATAATTGACAACAACTACTACAAGAACATATTGCAACACAAGGGACTGTTGACTGTGGATGAAGAACTGGCCACTGACCCAAGAACCGCACCTTATGTCCAAAAAATGGCAGATGACAATGAATACTTCTACCAACAATTCTCAAGGGCCATTCTTTTGTTATCGGAGAACAATCCTCTCACTGCAGATCAAGGTGAAATCAGAAAGGATTGTCGCTTTGTCAATGCCAATTAG 984 0.4472 MAANLKPRFNTCSLFLLLLLHFNLGRSQLEVNYYSDTCPKAEEIIKQQVIELYNKHGNTAVSWVRNLFHDCVVKSCDASLLLATVGDVVSEQTSERSFGMRNFKYINTIKAALERECPLTVSCADIVALSARDGIVMLGGPRIEMKTGRKDSKESYTTVLENFIPNHNDSISLVLSRFQAIGIDTQATVALLGAHSVGRVHCMNLVHRLYPTVDETLDPAHAEYLKRRCPTPNPDPKAVLYARNDLKTPMIIDNNYYKNILQHKGLLTVDEELATDPRTAPYVQKMADDNEYFYQQFSRAILLLSENNPLTADQGEIRKDCRFVNAN 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi543g00017 327 SUPERFAMILY Heme-dependent peroxidases 28 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi543g00017 327 PANTHER - 14 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi543g00017 327 Gene3D - 32 325 - -
Sebi543g00017 327 Pfam Peroxidase 46 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi543g00017 327 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi543g00017 327 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi543g00017 327 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi543g00017 327 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi543g00017 327 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi543g00017 327 ProSiteProfiles Plant heme peroxidase family profile. 28 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi543g00017 327 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi543g00017 327 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi543g00017 327 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi543g00017 327 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi543g00017 327 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi543g00017 327 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi543g00017 327 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi543g00017 327 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi543g00017 327 FunFam Peroxidase 165 304 - -
Sebi543g00017 327 Gene3D Peroxidase, domain 2 165 304 - -
Sebi543g00017 327 FunFam Peroxidase 32 173 - -
Sebi543g00017 327 CDD secretory_peroxidase 28 324 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi543g00017 Sebi-Chr543 170953 172742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi543g00017 31 325 Peroxidase AT2G37130 74.662 2.68e-171 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi543g00017 K00430 - gmx:100811277 564.303