Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi543g00015 ATGGCTGACGACTTCAATAAAGTCCCTCCTTCCTTCGATCGCATGGATTCTGATTCAAAAGGGTTCAACCCGGCATTAATTGTTCTCCTGGTTGTCGCTGGGTTGCTGTTGGTATTCCTCGTTGGAAATTATGTACTCTACTCATACGCACAGAAGACCCTCCCTCCTAGAAAAAAGAAGCCAATCTCGAAGAAGAAGATGAAAAAGGAGAGACTGAAGCAAGGCATCTCGGCACCTGGGGAGTAG 246 0.4675 MADDFNKVPPSFDRMDSDSKGFNPALIVLLVVAGLLLVFLVGNYVLYSYAQKTLPPRKKKPISKKKMKKERLKQGISAPGE 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi543g00015 81 Pfam DNA binding protein S1FA 17 81 IPR006779 GO:0003677|GO:0005634|GO:0006355
Sebi543g00015 81 MobiDBLite consensus disorder prediction 57 71 - -
Sebi543g00015 81 MobiDBLite consensus disorder prediction 54 81 - -
Sebi543g00015 81 PANTHER DNA-BINDING PROTEIN S1FA2 15 81 IPR006779 GO:0003677|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi543g00015 Sebi-Chr543 158996 160879 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Sebi543g00015 S1FA 1.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi543g00015 - - qsa:O6P43_006686 120.168