Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi543g00008 ATGGGGAGGAAGGGAAATTGGTTTTCCTCTGTGAAGAAAGCTCTCAGCCCTGAGTCAAAGGAGAAGAAAGAACAGAAATCAAGCGGATCAAAGAAGAAATGGTTTGGGAAGCAAAAATTGCAGACTTCAGAATCATACTCGGAAACGGATAGAGCACCTCCTCCTCCTCCACCTGAAGAGATTATTTTAACTCATGTTGAGGATGAAAACAGTCATGATCATGATCACGTTGAAGTTGCAACTGCTATAGATGCTGAGAGGCCTGTTCCTGCTGTTCAGACAGAAGTTGCTGAGGTTCAAGCCACTATAATTGCTCAGCCTGCCTGTAAACCAAAGGATGAAGTGGCAGCGGTCAAGATTCAAACAGCTTTTCGGGGATACATGGCAAGAAGAGCATTGCGGGCTTTAAGGGGGCTGGTCAGGTTGAGATCACTGATGGAAGGGCCAGTGGTGAAACGACAAGCCATTAGTACCCTCCGCTCTATGCAGACATTAACTCATGTGCAATCTCAGATTCGTTCTAGGAGGCTCAGGATGTTAGAGGAGAATCAAGCTCTGCAAAAACAGCTCCTACAGAAGCACACAAAAGAACTAGAAAGCATGCGGATTGGGGAGGAATGGGATGACAGCCTACAATCCAAGGAACAAATTGAAGCCAAGTTACTAAGCAAGTATGAGGCTGCTATGAGAAGAGAAAGAGCAATGGCTTATTCATTCTCTCATCAGCAAAACGGGAAGAACTCATCGAGATCTATGAACCCAATGTTCATGGATCCAACCAATCCTACCTGGGGTTGGAGCTGGTTGGAACGATGGATGGCAGCGCGGCCTTGGGAGAGCAATAGCCAGGTGGAGAAAGAGAAGAATGACCATTCATCTGTAAAAAGTTCAAGTCGCGGCATTACCAGTGCTGAAATCAGCAAATCATTTGCTCGTTTCCAGCTCAATTCTGAAAGGAATTCTCCAACTGCCAGCCAAGCTCCAGGCTCACCTAACTTCCAGTCCCATTCAACTCCTTCCAAGCCAGCAGCTGGTAAGAAAGTGAAGAAGGCAAGTCCAAAGGACAACTTGGTTATGGATGATGACACCAAAAGCATGGTGAGTGTGCAGTCAGACCGGCTCCGAAGGCACTCCATTGCTGGATCAATAGTGAGAGATGATGAAAGCCTTGCAAGCTCTGCATCAGTTCCAAGTTACATGGTGCCAACTAAATCTGCAAAAGCAAAGTCCAGGATGCAAAGTCCATTAGCTCCTGTAGAGAATGGAACACCAGAGAAGGGGTCCTTTGGGACTGCAAAGAAACGCCTCAGTTTCCCAGCTTCACCTGCCAGACCAAGGCGGCATTCAGGTCCACCAAAGGTAGAAAGCAGCTTGAATGCAGAAATCACTGTTGGCAATGGTGTGGCTGCTTGA 1413 0.4706 MGRKGNWFSSVKKALSPESKEKKEQKSSGSKKKWFGKQKLQTSESYSETDRAPPPPPPEEIILTHVEDENSHDHDHVEVATAIDAERPVPAVQTEVAEVQATIIAQPACKPKDEVAAVKIQTAFRGYMARRALRALRGLVRLRSLMEGPVVKRQAISTLRSMQTLTHVQSQIRSRRLRMLEENQALQKQLLQKHTKELESMRIGEEWDDSLQSKEQIEAKLLSKYEAAMRRERAMAYSFSHQQNGKNSSRSMNPMFMDPTNPTWGWSWLERWMAARPWESNSQVEKEKNDHSSVKSSSRGITSAEISKSFARFQLNSERNSPTASQAPGSPNFQSHSTPSKPAAGKKVKKASPKDNLVMDDDTKSMVSVQSDRLRRHSIAGSIVRDDESLASSASVPSYMVPTKSAKAKSRMQSPLAPVENGTPEKGSFGTAKKRLSFPASPARPRRHSGPPKVESSLNAEITVGNGVAA 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi543g00008 470 Pfam IQ calmodulin-binding motif 116 134 IPR000048 GO:0005515
Sebi543g00008 470 MobiDBLite consensus disorder prediction 1 61 - -
Sebi543g00008 470 MobiDBLite consensus disorder prediction 317 366 - -
Sebi543g00008 470 PANTHER IQ-DOMAIN 5-RELATED 1 451 - -
Sebi543g00008 470 MobiDBLite consensus disorder prediction 317 341 - -
Sebi543g00008 470 MobiDBLite consensus disorder prediction 280 301 - -
Sebi543g00008 470 MobiDBLite consensus disorder prediction 15 31 - -
Sebi543g00008 470 Pfam Protein of unknown function (DUF4005) 339 448 IPR025064 -
Sebi543g00008 470 MobiDBLite consensus disorder prediction 348 366 - -
Sebi543g00008 470 MobiDBLite consensus disorder prediction 34 49 - -
Sebi543g00008 470 ProSiteProfiles IQ motif profile. 113 141 IPR000048 GO:0005515
Sebi543g00008 470 Coils Coil 177 197 - -
Sebi543g00008 470 SMART iq_5 112 134 IPR000048 GO:0005515
Sebi543g00008 470 MobiDBLite consensus disorder prediction 402 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi543g00008 Sebi-Chr543 85656 88733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi543g00008 1 470 IQD Protein Family AT5G03040 51.667 1.75e-144 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi543g00008 - - gmx:100799058 692.189