Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi541g00037 ATGGCAAAGGAAGAAGTCAGTGATGATGGTTCCTCAAGTGTTGAGACTGGGGATTTAGAATCTCACCCTCGACTTAGTCTGGAGAAGGAGACAGGCTTGGCAAGTTGTCGTGTGTGCCAGTGTGCTGAGTCTGATAAAAGGGGAGATGCTGCACTAGAATTTCTGGGCATCACTCCTGTTATAGAGTCTGATGGCAAGGGGGTTCAAAAAGATATGTCTCTTCATAAAAATATTGAAAACAAATCTGGGGTGGTGGAATTTGTAGGCCCTGATGGGGAGGTTTTCATTTGTAAAAATGATTTGGAAATTGGTTTGTCTCATCAAGATGCATTGCTTGAACTTGGTTGTTGTTGTAAAAATGACCTTGCTTTAGTGCATTATGCTTGTGCACTCAAGTGGTTTGTCAACCATGGATCTACCATTTGTGAAATATGTGGACATATAGCGAATAATATCAGAGTATCTGACTTCAATAAGGTTGTTGGTTCTTTGAAGGAGTATGAAGCATTGAGGGAAAGAACTGCCACTGGGGATCCTGGTCCTGCTCAAGCTCATGCAAATAATGGGGTGGATCCTGATGCTGTGGCTGCTATCCGGAGGCAACGACTAAGTGAAATAGCACTATGGTTTTGTCCTCATAACAGCAGTAGCATTACCAACAATAGCAATGTGGATACAGTTTCACAGGTTGTCTCCGAGCAGCCTTTGAATATTGTTCCTGAAGATGCTGGCCCTGAACAGAATCCTGCAACTAAGTGGGCTGTAGAAGGTACTGGGATCCTGCTAGCTACAGGCCTGCTTACCATCACCCTTGCATGGCTTATCGCTCCTCGTGTTGGAAAGAAAACTGCAAAAAGTGGTCTTCATATCCTACTTGGAGGTGTTTGTGCTTTAACAGTGGTGATTTTCTTCCGCTTTTTTGTGCTCACCAGAATCAAGTATGGACCTGCACGATATTGGGCAATCTTGTTCGTTTTCTGGTTTCTTGTCTTTGGAATATGGGCTTCACGGACGCATGGTGCCCATACAACATGTTCTGCAACTCTATCAGTGGTGCCAGAATTAGAAGAGAAGCAAGTATTTGATGGGGAGAAGGCTGCTTTACTTGTTAAAGAGCTCAGAAAGAGCTTTGATTCAGGCAAGACAAAGAGCTATGAATGGCGGATTTCCCAATTGGAGGGCATTGCTAAGATGCTAGAAGAGAAAGAGAAGGAAATTACTATAGCTCTTGATAAGGACCTTTCTAAACCTGGACTTGAAGCATTTATAACTGAGATTTCCCAGGCAAAATCTTCGTGTAGTGAAGCAATTCAAGAATTGAAACACTGGATGAAGCCTGAAAAGGTGAATACTTCAATAACAACATTTCCATCATCAGCAGAGATTGTGTCAGAACCACTAGGAGTTGTGTTGGTCATCTCAACATGGAACTTTCCTTTCTTGTTATCAATGGATCCAGTCATTGGAGCCATTTCAGCGGGTAATGCAGTGGTTCTGAAACCGTCAGAAATATCTCCAGCAACGTCATCACTGCTTGCAAATTTGCTCGAAAATTATCTAGACAACTCTGCCATAAGAGTTGTTGAAGGGGCTATTCCTGAAACAACTGCACTCCTAGAGCAGAAATGGGATAAGATACTTTACACTGGTAGTGCTAGAGTAGGTCGCATTGTCATGGCTGCTGCTGCGAAGCATCTTACACCAGTGGTCTTGGAACTTGGAGGGAAGTGCCCAGCTGTTGTTGATTCAGATGTCAACTTACAAGTTACTGCTAGGAGGATAATAGGTGGCAAGTGGGCATGCAATAGTGGACAAGCATGCATTTCTGTTGATTATATCATCACAAGAAAAGAATTTGCTCCATCATTGATAAATGCTTTAAAAGAAGAATTGGAGCAATGTTTTGGGAAAGATCTGATGGAATCCAAAGACATGTCACGTATTGTGTCTCCGACCCAATTTGCACGACTTGTGAAGCTCTTGGATGAGGATAAGGTATCTGACAAAATTGTTTTAGGAGGTCAGAGGGATGAGAAGAAATTAAAGATTGCTCCAACTATCCTATTGGATGTTCCAGAAGAAGCTATGGTAATGCAAGAGGAGATATTTGGACCAATACTGCCAATTATCACTGTGAGTACTAGATCACAACAGCAAACTAGTAGTGGCCATTCCTTTGTTCCAATCCAACTCCTTTGCAAAAACCATCTTACTGTAGATAACATAGAAGATTGTTTCAGTATAATCAAATCAAAGCCAAAACCTCTCGCTGCATATCTCTTCACAAACAATGAGCAACTGAAGAAGGATTATGTGGAAAAGATATCTTCTGGGGGGATGCTCATCAATGACACTGTCATACATGTTGCAACTCGTGGTTTGCCTTTTGGAGGAGTAGAAGAGAGTGGCATGGGTTCTTACCATGGAAAATTCTCTTTTGATAGTTTCAGCCATAAAAAGTCAGTTCTCTATAGAAGTTTTGATGCAGATTCATCCCTAAGGTACCCTCCATATACACCCAAGAAGGAAAAATTGTTGAAGGCCGTTATCAGTGGCAACATTTTTCAGATAATTTCTGCTTTATTTGGATGGTCTTAA 2598 0.4184 MAKEEVSDDGSSSVETGDLESHPRLSLEKETGLASCRVCQCAESDKRGDAALEFLGITPVIESDGKGVQKDMSLHKNIENKSGVVEFVGPDGEVFICKNDLEIGLSHQDALLELGCCCKNDLALVHYACALKWFVNHGSTICEICGHIANNIRVSDFNKVVGSLKEYEALRERTATGDPGPAQAHANNGVDPDAVAAIRRQRLSEIALWFCPHNSSSITNNSNVDTVSQVVSEQPLNIVPEDAGPEQNPATKWAVEGTGILLATGLLTITLAWLIAPRVGKKTAKSGLHILLGGVCALTVVIFFRFFVLTRIKYGPARYWAILFVFWFLVFGIWASRTHGAHTTCSATLSVVPELEEKQVFDGEKAALLVKELRKSFDSGKTKSYEWRISQLEGIAKMLEEKEKEITIALDKDLSKPGLEAFITEISQAKSSCSEAIQELKHWMKPEKVNTSITTFPSSAEIVSEPLGVVLVISTWNFPFLLSMDPVIGAISAGNAVVLKPSEISPATSSLLANLLENYLDNSAIRVVEGAIPETTALLEQKWDKILYTGSARVGRIVMAAAAKHLTPVVLELGGKCPAVVDSDVNLQVTARRIIGGKWACNSGQACISVDYIITRKEFAPSLINALKEELEQCFGKDLMESKDMSRIVSPTQFARLVKLLDEDKVSDKIVLGGQRDEKKLKIAPTILLDVPEEAMVMQEEIFGPILPIITVSTRSQQQTSSGHSFVPIQLLCKNHLTVDNIEDCFSIIKSKPKPLAAYLFTNNEQLKKDYVEKISSGGMLINDTVIHVATRGLPFGGVEESGMGSYHGKFSFDSFSHKKSVLYRSFDADSSLRYPPYTPKKEKLLKAVISGNIFQIISALFGWS 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi541g00037 865 SMART ringv_2 96 146 IPR011016 GO:0008270
Sebi541g00037 865 Pfam RING-variant domain 109 145 IPR011016 GO:0008270
Sebi541g00037 865 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 374 820 IPR016162 GO:0016491
Sebi541g00037 865 Pfam Aldehyde dehydrogenase family 738 822 IPR015590 GO:0016491
Sebi541g00037 865 Pfam Aldehyde dehydrogenase family 364 716 IPR015590 GO:0016491
Sebi541g00037 865 MobiDBLite consensus disorder prediction 1 26 - -
Sebi541g00037 865 FunFam Aldehyde dehydrogenase 374 578 - -
Sebi541g00037 865 ProSiteProfiles Zinc finger RING-CH-type profile. 86 152 IPR011016 GO:0008270
Sebi541g00037 865 PANTHER ALDEHYDE DEHYDROGENASE 366 857 IPR012394 GO:0006081
Sebi541g00037 865 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 575 802 IPR016163 GO:0016620
Sebi541g00037 865 SUPERFAMILY ALDH-like 369 838 IPR016161 GO:0016491
Sebi541g00037 865 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 94 148 IPR013083 -
Sebi541g00037 865 SUPERFAMILY RING/U-box 107 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi541g00037 Sebi-Chr541 516535 526206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi541g00037 344 865 Aldehyde Dehydrogenase Gene Family AT4G34240 66.284 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi541g00037 K00128 - gmx:100800699 850.506