Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi541g00036 ATGTCTGTGCCTCCAAGTAGTGGCTTGTACCTTTCCCAGGCCACTGAACACAGAAATTTTGAGGGTGAAAGCTTCCACAAGTTTTTTGATTGTTGGATATCTGAGCAAAGCCAACACCTGAATGACCTTTTAGCAGCTGAATCAAATCAGGTTCCAAGTGAGAGAGCACAAGCACTGATTGAGAAGGTGATTGATCATTATGAGTTATACTACAAGGCTAAGTCAAGGTGGGCAAAACATGATGTTCTTGCCATGTTGTCCCCATCTTGGAGGAGCTCTTTAGAAGAGGCTTTTCTTTGGATTGGTGGGTGGAGACCAAGTATGGCATTCCACTTGCTATATTCCAAATCAAGCTTGCAATTTGAGGCCAGGTTGAATGAACTTATTCAAGGGATAAGAACATGTGACCTGGGGGATCTTTCAGCTGCTCAACTTGCTGAGTTTGATGATATGCAAAGGAGGACCATCAAAGAGGAGAGGGAAATCACAGATATGATGGCAAAGCATCAGGAAACAGTGGCTGATGCTCCAATGGTGGAGTTATCTCATGTGGTTACTGAGATGATTAGAGCCAATGAAGGTGGAGAGAGTGAGAATAAGGAATTACAAGACAGAATTGAGTCAACTCTTGAGCCAAAGGTGGAAGGTCTAGAGAAGATCCTGCACAAAGCTGATGATCTAAGGCTGAGAACACTGCAGGGCATTGTCAATATTCTGAGTCCACAACAGGCTATCCACTTCTTAATTGCTGCTGCAGAGCTTCACCTGAGGCTACATGAATGGGGCAAGAAGAAAGATGCCAAAAAAGCAAATTAA 816 0.4363 MSVPPSSGLYLSQATEHRNFEGESFHKFFDCWISEQSQHLNDLLAAESNQVPSERAQALIEKVIDHYELYYKAKSRWAKHDVLAMLSPSWRSSLEEAFLWIGGWRPSMAFHLLYSKSSLQFEARLNELIQGIRTCDLGDLSAAQLAEFDDMQRRTIKEEREITDMMAKHQETVADAPMVELSHVVTEMIRANEGGESENKELQDRIESTLEPKVEGLEKILHKADDLRLRTLQGIVNILSPQQAIHFLIAAAELHLRLHEWGKKKDAKKAN 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi541g00036 271 ProSiteProfiles DOG1 domain profile. 22 268 IPR025422 GO:0006351|GO:0043565
Sebi541g00036 271 Pfam Seed dormancy control 39 115 IPR025422 GO:0006351|GO:0043565
Sebi541g00036 271 Coils Coil 264 271 - -
Sebi541g00036 271 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 23 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi541g00036 Sebi-Chr541 513708 514523 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi541g00036 24 258 Calmodulin-binding Proteins AT1G77920 26.360 5.07e-19 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi541g00036 - - cam:101504084 399.823