Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi541g00034 ATGTCACACATTGCTTTAACTGCATCAGCCACAGCAACCGTCGTCGCTTTCCACCGCGGAGCAAAACAATGGAGCGCGCTATTTCCGAGAAGCATGGGAACTAATCAACCCTCCTTGTTCGCAAACTCTCCCAGGAAACGGTTGCAATTGCGGTTTTTAGCTACAGGGAAAAATGGCGGCAATGGAGGTGTTGCGGAGGAGATATCCGAAACCGAAAAAGCGCAAACGAATTTCGTGTGGCCTGATAACAAGAAGCCTAGGGTGTGCATATTAGGTGGCGGATTCGGTGGTTTGTATACTGCTTTGAGGTTGGAATCACTGGAGTGGCCTGACGACAAAAAACCACAGATAGCTCTTGTCGACCAGTCTGATCGTTTTGTTTTCAAGCCAATGTTGTATGAGCTTCTATCTGGTGAGGTGGACGAATGGGAAATAGCTCCTCGTTTCTCAGATTTGCTGGCAAACACTAGTGTGCAGTTTTTGAAAGATAGAGTAAAACTTTTGCATCCCTCTGATCATTGGGGAATGAATGGATCCAAAGCATCTACTTGTGGAGGAACTGTTCATCTTGAAAGTGGCCTTCATATTGAATATGACTGGCTGGTTCTTGCATTGGGAGCTGAATCTAAAGTGGATGTTGTACCAGGAGCGGCAGAATTTGCAATTCCTTTCTCCACGTTAGAGGATGCACGTAAAGTTAACAATAGATTAACAACATTAGAGAGAAAGACCTTTGGTAAGGACCTCCAAATTAGTGTGGCCATTGTTGGTTGTGGTTACTCTGGAGTTGAATTAGCTGCAACAGTAGCAGAGCGATTACAGAATAGAGGAATTGTGAGAGCAATTAATGTTGAAACAATGATCTGCCCAAATGCTCCACCTGGCAACAGGGAAGCTGCACTGAAAGTGCTTTCATCCAGGAAGGTTGAGCTTTTATTGGGTTATTTTGTCCGCTGTATACGGAGAGTCAGTGAATTGGAGTCTTCAGATACTCTGACAGGGGTAGATGAAAATTGCATTGAAATAGGACATGATTTTGAGAAATATATATTGGAGCTGCAACCTGCTGAAAGGGGAATGCAAAGTAAAATCATTGAAGCAGATTTGGTATTGTGGACTGTTGGATCCAAACCTCCTCTTCCTCAACTGGAATCTTCAGATGTGCCATTTGTAATTCCCCTTAATGCCAGGGGACAAGCTGAAACAGATGAAACTCTTCGTGTTAAGGGTCACCCACGGATATTTGCTCTTGGTGACTCTTCTGCATTAAGGGATTCAAATGGAAGGATCCTTCCAGCCACTGCACAGGTTGCATTTCAGCAAGCTGACTTTACTGGTTGGAATCTGTGGGCTGCAATCAATGGTCGTCCACTTTTGCCATTTAGGTTTCAGAATCTAGGTGAGATGATGACCCTGGGAAGAAATGATGCTGCCATTTCTCCGAGTTTTGTTGAGGGGCTAACCTTAGAAGGTCCTATTGGTCATACTGCGAGGAAGATAGCTTATTTGATCAGGTTACCATCAGATGAACATAGGCTTAAAGTGGGGATTAGCTGGCTTACAAAATCTGCTATTGATTCGGTGTCATCGCTTCAAAGTACCTTGTCTAAAGTCTTTTCGGGTTCATAG 1629 0.4414 MSHIALTASATATVVAFHRGAKQWSALFPRSMGTNQPSLFANSPRKRLQLRFLATGKNGGNGGVAEEISETEKAQTNFVWPDNKKPRVCILGGGFGGLYTALRLESLEWPDDKKPQIALVDQSDRFVFKPMLYELLSGEVDEWEIAPRFSDLLANTSVQFLKDRVKLLHPSDHWGMNGSKASTCGGTVHLESGLHIEYDWLVLALGAESKVDVVPGAAEFAIPFSTLEDARKVNNRLTTLERKTFGKDLQISVAIVGCGYSGVELAATVAERLQNRGIVRAINVETMICPNAPPGNREAALKVLSSRKVELLLGYFVRCIRRVSELESSDTLTGVDENCIEIGHDFEKYILELQPAERGMQSKIIEADLVLWTVGSKPPLPQLESSDVPFVIPLNARGQAETDETLRVKGHPRIFALGDSSALRDSNGRILPATAQVAFQQADFTGWNLWAAINGRPLLPFRFQNLGEMMTLGRNDAAISPSFVEGLTLEGPIGHTARKIAYLIRLPSDEHRLKVGISWLTKSAIDSVSSLQSTLSKVFSGS 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi541g00034 542 SUPERFAMILY FAD/NAD(P)-binding domain 84 454 IPR036188 -
Sebi541g00034 542 PRINTS FAD-dependent pyridine nucleotide reductase signature 88 107 - -
Sebi541g00034 542 PRINTS FAD-dependent pyridine nucleotide reductase signature 252 270 - -
Sebi541g00034 542 PRINTS FAD-dependent pyridine nucleotide reductase signature 198 216 - -
Sebi541g00034 542 PRINTS FAD-dependent pyridine nucleotide reductase signature 367 383 - -
Sebi541g00034 542 SUPERFAMILY FAD/NAD(P)-binding domain 239 385 IPR036188 -
Sebi541g00034 542 PANTHER APOPTOSIS-INDUCING FACTOR 1 19 538 - -
Sebi541g00034 542 Pfam Pyridine nucleotide-disulphide oxidoreductase 87 442 IPR023753 GO:0016491
Sebi541g00034 542 Gene3D - 83 515 - -
Sebi541g00034 542 FunFam Alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial 83 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi541g00034 Sebi-Chr541 491082 495204 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi541g00034 76 443 Chloroplast and Mitochondria Gene Families AT4G21490 22.656 1.10e-07 52.8