Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi540g00022 ATGGATGATGACACTAAAGTTAGAAGGAAAGAGGTGTTGGGTAGCCTCTGTGATCAAAGGGCAAGAATGTTGCAAGATCAATTTAGTGTTAGTGTCAACCATGTCCATGCTCTTGCCATCCTTGTTTCCACCTTCCATTACTACAGAACCCCTTCTGCCATTGACCAGGAAACCTTTGCTGAGTATACAGCCAGGACAGCATTTGAGCGGCCATTGCTGAGTGGTGTGGCCTATGCACAAAGAGTTGTTAACTCAGAGAGAGAGAGATTTGAGAAACAACATGGATGGGTTATAAAGACAATGGAGAGAGAGTCTTCACTGGTTAGAGATGAGTATGCACCTGTGATATTTGCTCAAGAAACTGTCTCATACCTTGAGTCTCTTGATATGATGTCTGGGGAGGAGGACAGAGAAAACATTTTAAGGGCTAGGGCCACTGGGAAAGCTGTTCTGACTAGTCCTTTCAGGCTGTTGGGTTCTCATCATCTTGGTGTGGTTTTAACATTCCCTGTGTATAAGTCTAAGCTCCCTCTGAAGCCAACAGTGGAAGAACGCATTGAAGCAACTGCAGG 572 0.4493 MDDDTKVRRKEVLGSLCDQRARMLQDQFSVSVNHVHALAILVSTFHYYRTPSAIDQETFAEYTARTAFERPLLSGVAYAQRVVNSERERFEKQHGWVIKTMERESSLVRDEYAPVIFAQETVSYLESLDMMSGEEDRENILRARATGKAVLTSPFRLLGSHHLGVVLTFPVYKSKLPLKPTVEERIEATAG 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi540g00022 191 ProSiteProfiles CHASE domain profile. 50 191 IPR006189 -
Sebi540g00022 191 FunFam Histidine kinase 4 54 191 - -
Sebi540g00022 191 Gene3D CHASE domain 54 191 IPR042240 -
Sebi540g00022 191 SMART CHASE_2 50 189 IPR006189 -
Sebi540g00022 191 Pfam CHASE domain 53 191 IPR006189 -
Sebi540g00022 191 Gene3D - 1 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi540g00022 Sebi-Chr540 519744 520580 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi540g00022 1 191 Histidine Kinase Gene Family AT2G01830 84.896 1.00e-110 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi540g00022 K14489 - gmx:100776599 366.696