Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi53g00130 ATGGCCTTGCAGAACATTGGTGCCAGCAATAGCGATGATGCCTTCTACAGGTATAAGATGCCTAAAATGATTACCAAAATTGAGGGTAGAGCGTTGGCAAGGCCAGCCTCCTACACAACAAAGTATTTTGGTTGTGAACTTGGAGCCCAATCAAAATTTGATGAGAAAACTGGGACTTCTCATGTTAATGGGGCACATGATACTGCAAAACTTGCCGGTCTTCTAGAGAACTTCATCAAGAAATACGTCCAGTGTTATGGTTGTGGAAATCCTGAAACTGAGATCATAATTACTAAGAATCAAATGATCCAGCTGAAATGTGCTGCTTGTGGTTTTGTGTCTGATGTGGATATGAGAGACAAGCTGACTACCTTCATCATTAAGAACCCTCCTGAAATCAAGAAAGGATCCAAAGACAAGAAGGCCATGCGGAGAGCTGAGAAAGAGAGACTGAAGGAAGGTGAAGCAGCTGATGAGGAGCTGAAAAAATTGAAGAAAGAGAATACATCACTAGAGGCTGCTAAACAACGTATCCAAGAACAGTTAAGTGCTGTGACAGCTGATATGGTCATGCTCTCCACTAATGAACCAGAGAAGAAGGAGAAAGCACAAGCAGCAAATAAGGTAAGTAATAATTCTGAGAATGGTAACTCCATGCACTGCAGGACTCTGGTTGAGGATGTCAAAGCAAATTTGAAGAAAGGTGCTACAGCAGAAGAATTGCTGACCCATCTGGGAACACTTACTGGATCTGCTCAAGAAAAGATGATTGCTCTGTATGAAGCCCTTTTTGAGGGCATTGAGAAAGGGTTTGGAAAAGAAGCTCTCAAGAAGAAGAGCTACCTTGCTGCTGCAGTTGCTGAGGATGAGGGAATGCAGTTGTTATTACTGCGTGCAATTGAGGAATTTTCTTGCAAGTCTACTACGTCCAATGCATTAAAGGAGGTTGCTCTGGTCTTGAAGGCTCTCTATGATGCGGATGTGTTGGAGGAAGAGCACATAGTACAGTGGTATCAGAAGGGACTGAAAGGCGATAATAAGAACTCCCAGATTTGGAAGAATGCTCAACCTTTCATTGATTGGCTTCAGAATGCGGAATCAGAATCGGAGGAAGAATGA 1119 0.429 MALQNIGASNSDDAFYRYKMPKMITKIEGRALARPASYTTKYFGCELGAQSKFDEKTGTSHVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKNQMIQLKCAACGFVSDVDMRDKLTTFIIKNPPEIKKGSKDKKAMRRAEKERLKEGEAADEELKKLKKENTSLEAAKQRIQEQLSAVTADMVMLSTNEPEKKEKAQAANKVSNNSENGNSMHCRTLVEDVKANLKKGATAEELLTHLGTLTGSAQEKMIALYEALFEGIEKGFGKEALKKKSYLAAAVAEDEGMQLLLLRAIEEFSCKSTTSNALKEVALVLKALYDADVLEEEHIVQWYQKGLKGDNKNSQIWKNAQPFIDWLQNAESESEEE 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi53g00130 372 FunFam Eukaryotic translation initiation factor 5 217 363 - -
Sebi53g00130 372 SUPERFAMILY ARM repeat 222 366 IPR016024 -
Sebi53g00130 372 CDD W2_eIF5 224 370 - -
Sebi53g00130 372 Gene3D - 2 88 - -
Sebi53g00130 372 SMART 542_3 279 368 IPR003307 GO:0005515
Sebi53g00130 372 MobiDBLite consensus disorder prediction 134 156 - -
Sebi53g00130 372 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 10 85 IPR016189 GO:0003743|GO:0006413
Sebi53g00130 372 FunFam Eukaryotic translation initiation factor 5 89 129 - -
Sebi53g00130 372 Gene3D - 89 129 - -
Sebi53g00130 372 Coils Coil 154 188 - -
Sebi53g00130 372 ProSiteProfiles W2 domain profile. 211 372 IPR003307 GO:0005515
Sebi53g00130 372 SMART eIF2Bneu4 15 113 IPR002735 GO:0003743|GO:0006413
Sebi53g00130 372 Pfam eIF4-gamma/eIF5/eIF2-epsilon 293 372 IPR003307 GO:0005515
Sebi53g00130 372 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 82 117 IPR016190 GO:0003743|GO:0006413
Sebi53g00130 372 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 371 IPR045196 GO:0003743|GO:0006413
Sebi53g00130 372 Pfam Domain found in IF2B/IF5 11 111 IPR002735 GO:0003743|GO:0006413
Sebi53g00130 372 Gene3D - 211 372 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi53g00130 1 365 Eukaryotic Initiation Factors Gene Family AT1G77840 55.046 1.94e-155 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi53g00130 K03262 - qsa:O6P43_005660 543.502