Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi53g00120 ATGGAAGAAGAAGGGGAAGCTAGTGAAAGCCCACAACAACAAGACCACCAGCAGCCGTTAACCATTTTCTATGATGGCAAGATTTGCGTTTCTGATGTCACAGAACTTCAGGCTAGATCTATTTTAATGCTTGCGAATAAAGAGATAGAGGAAAAAGTGAGGACACCAACAACAAGTGGGTCAGAGCCATCTTCACCAATGCCAGTGTCATCACATTACAATTTGTATAGCCCTGGTAGTGGTCTTTCCATGAAAAAATCGCTGCAGAGGTTTCTTCAGAAGAGGAAGAATCGGGTCCAAGAAGCATCCCCATACCAAATGAGCAAAATTAATTAA 336 0.4226 MEEEGEASESPQQQDHQQPLTIFYDGKICVSDVTELQARSILMLANKEIEEKVRTPTTSGSEPSSPMPVSSHYNLYSPGSGLSMKKSLQRFLQKRKNRVQEASPYQMSKIN 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi53g00120 111 SMART tify_2 13 47 IPR010399 -
Sebi53g00120 111 MobiDBLite consensus disorder prediction 49 111 - -
Sebi53g00120 111 Pfam Jas motif 85 106 IPR018467 -
Sebi53g00120 111 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 9 108 IPR040390 -
Sebi53g00120 111 MobiDBLite consensus disorder prediction 56 87 - -
Sebi53g00120 111 Pfam tify domain 17 46 IPR010399 -
Sebi53g00120 111 ProSiteProfiles Tify domain profile. 13 47 IPR010399 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi53g00120 4 106 Tify Gene Family AT1G30135 47.115 5.05e-23 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Sebi53g00120 tify 6e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi53g00120 - - gmx:100305565 143.28