Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi53g00108 ATGGATGAGCTTTTAGCGGTGGTTGGTTACAAGGTTAGGTCATCAGACATGGCTGAAGTTGCTCAGAAGCTTGAACAGTTAGAAGAAGCCATGGGAAATTTCCAAGACGAAGACATCATCGCTCAACAACTCTCATCAGATACCGTCCATTACAACCCTTCTGATATCTCCAACTGGCTTCAAACCATGCTCTCTAATTTCGATCCTCCACCTCCTTCTTCTCTCTCATCTTCTTCCGATTACGATCTCAAAGCCATTCCAGGGAAAGCAATCTACGCTTCCGGACCAGAATCCGAATCTCCGTCCAACAAACGAACCAAAACAACAACCGCCGAGTCAACTCGTTCGGTTGTCGTTGTCGACTCGCAGGAAAACGGGATCCGACTCGTTCACAGCCTCATGGCTTGCGCTGAAGCGGTGGAACAGAACAAGCTAGGAGTAGCAGAAGCTCTGGTGAAGCAGATCGGATACCTCGCGGTTTCACAAGAAGGTGCTATGAGGAAAGTTGCTACCTACTTCGCTGAAGGTCTTGCGAGAAGAATCTACAGAGTCTATCCTCCACAACCGCAACAGCATTTTCTCTCTGATACTCTTCAGATCCATTTCTATGAAACCTGTCCTTACCTCAAGTTCGCTCACTTCACTGCGAATCAAGCCATTCTTGAAGCGTTTCAAGGCAAGGATCGTGTTCATGTCATCGATTTCGCAATCAACCAAGGCATGCAGTGGCCGGCGTTGATGCAGGCTCTGGCTCTTCGACCTGGTGGTCCACCGGCTTTTCGTCTCACCGGAATCGGACCTCCGGCGCCGGATAACTCCGATCACCTCCAACAGGTTGGTTGGAAACTCGCTCAGTTAGCGGAAACGATTCATGTTCAGTTTGAATACCGAGGATTCGTAGCTAACAGTCTCGCGGATCTAGATGCTTCCATGCTTGAACTCCGTTCACCGGAAACGGAAGCTGTTGCCGTTAACTCTGTTTTCGAGCTTCATAAGCTTCTTGCTCGTCCCGGCGCGTTGGAGAAGGTTTTCTCTGTTATTCGTCAGATTCAGCCGGAGATTCTCACCGTCGTGGAGCAAGAAGCGAGCCACAATGGACCGGGTTTTCTCGACCGGTTCACTGAGTCGCTGCACTATTACTCCACCTTGTTTGACTCGCTGGAGGGGTCTTCGGTTGACCCGCAGGACAAGACCATGTCAGAGATTTACCTTGGGAAGCAAATCTGCAACGTGGTGGCGTGTGAAGGAGTGGACCGGATCGAGCGGCACGAGACGCTGAACCAGTGGCGGAACCGGTTCGGGTCGGCTGGGTTTTCTCCGGTTCATTTGGGATCCAACGCGTTCAAGCAAGCTAGCATGTTGCTGGCACTTTTCGCCGGTGGGGATGGGTATAGGGTTGAGGAGAACGATGGGTGTCTCATGTTGGGTTGGCACACTAGGCCAATGATTGCCACCTCTGCGTGGCAACTCGCTAACAAATCGGTTGCTGCTCACTGA 1497 0.5124 MDELLAVVGYKVRSSDMAEVAQKLEQLEEAMGNFQDEDIIAQQLSSDTVHYNPSDISNWLQTMLSNFDPPPPSSLSSSSDYDLKAIPGKAIYASGPESESPSNKRTKTTTAESTRSVVVVDSQENGIRLVHSLMACAEAVEQNKLGVAEALVKQIGYLAVSQEGAMRKVATYFAEGLARRIYRVYPPQPQQHFLSDTLQIHFYETCPYLKFAHFTANQAILEAFQGKDRVHVIDFAINQGMQWPALMQALALRPGGPPAFRLTGIGPPAPDNSDHLQQVGWKLAQLAETIHVQFEYRGFVANSLADLDASMLELRSPETEAVAVNSVFELHKLLARPGALEKVFSVIRQIQPEILTVVEQEASHNGPGFLDRFTESLHYYSTLFDSLEGSSVDPQDKTMSEIYLGKQICNVVACEGVDRIERHETLNQWRNRFGSAGFSPVHLGSNAFKQASMLLALFAGGDGYRVEENDGCLMLGWHTRPMIATSAWQLANKSVAAH 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi53g00108 498 Gene3D - 1 67 IPR038088 -
Sebi53g00108 498 MobiDBLite consensus disorder prediction 92 115 - -
Sebi53g00108 498 SMART DELLA_2 2 77 - -
Sebi53g00108 498 Coils Coil 17 37 - -
Sebi53g00108 498 Pfam GRAS domain family 129 489 IPR005202 -
Sebi53g00108 498 Pfam Transcriptional regulator DELLA protein N terminal 2 71 IPR021914 -
Sebi53g00108 498 ProSiteProfiles GRAS family profile. 120 489 IPR005202 -
Sebi53g00108 498 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 97 484 IPR005202 -
Sebi53g00108 498 MobiDBLite consensus disorder prediction 96 115 - -
Sebi53g00108 498 FunFam DELLA protein GAI 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi53g00108 Sebi-Chr53 2034323 2035819 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi53g00108 1 491 GRAS Transcription Factor Family AT1G14920 71.930 0.0 746
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sebi53g00108 GRAS 4.9e-135 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi53g00108 K14494 - gmx:547718 798.89