LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi53g00076	ATGGATATATTTGAGGATAAATCAACTGTTAATTTGGACCAAGATAAAGATCCAAATTTTGATGTTTCTTTTGGGGATAACTGTAGTGGAGAAAACAATGATGATAGTTGTGATGGAGAAGGCAATGATGTTAGTTGTTCTGGAGAAGACATTGATGATAGCTGTAGTGAAGAGGATTTTTGTATTGGTGATGAGAAAGAGAAAGATACTGAGGAAAAAGTAAAAGTAGGTGAGTTGGAAAAAAGGATTTTAGACTTAACAGCTGATGATATACTGTCATTGGAGTTTGGCAGTGAAGAGCTAGCATTTGCATTTTATGAGTCATATGCAAAAGCTTTAGGATTTGTGGTTAGGAAAGATGATGTTAAGAAGGATATAAGGGGACAGATTATAATGCGGCAGTATGTTTTCAATAAGGAAGGATTAAGGAAGAAAAAACATTTCATGAGGTTAGATAGGAAAAGAGATCATAGACCTATCACTCGCACTAAGTGTAACGCTAAGCTCCGGATCCACTACCATCAAAGGTCAAGTAAATGGAGAGTGGTCTCGTTTGAGGAGTGTCACAATCATGAACTTACTCCAGCAAAATTTGTGCATTTGATCCCTGCATACCGTAAAATGGCTGATGCAGACAAAGCGCAGGTGGATAGTTTGCATTCGTTTGGGGTAAGAACATGTCACATAATGGGGTACCTTGTATCTCGAAAGGGTGGATATGGTGGTGTTGGTTTTACTAGAAAGGATTTATATAACTATTTGGACTGCAAAACTCATATGAAGATTAAAGATGGGGACGCACGTGCTGCATTGAGTTATTTACAAGGCAAAGCTGACAATGGAGGAACATTAGTTGCTAGATACCAAAATACTAGAGATGTGGTGACAGATGGAGGTGGAGCTATGAGGGAGGCTATAAGGCATGTTTTTCCCGAGTCTTTACATCATTTGTGTGCTTGGCACTTGCATAATAATGCATGTGAAAATGTGAAGCATCCAGCATTTTTGGAGGACTTTAAGACAGCTATATGGGTTTCAAAGACATATGAAAATAGGAGGCTGTGGGCGACTGCTTATTTGCGTGATAAGTTTTTTGGTAGGATTCGGACAACATCTCAGTGTGAAGCTATTAATTCAGTCATTAAGGTATTGTTTGAATCTCGCGGAATTCCTTGTTCCCATATCATTTCTGTCATGAAAAATGAACATATGGAACATATTCCAAGTAACTTGATATTGTCAAGGTGGACAAAGAATGCCAAGAGAGATGTCCTTTATTCTTCACAGTCAGATGAAACAGATGATGAATTAGGCAATACCATTCGTTACTCTGCCTTCATTTCTGCGTGTAATTCTTTGTTTGAATCTGGGGGGAAAAAGAGGGGGTGTTTCTCTGAATTAGTTGATGATATTCACAAGCTGACTTTGAAGTATAAAACCTATGGAGCTCAACATTCCTCTCAAAGTGATCCAGCTAAAAACATTGGGGAGCCTACTATGGTGAAAACTAAAGATGATAATGAATTGAGCATACCGGCTGATTGTGAGCCTGAGGTTAGGGATTGTGATGACTCTATGGCTCAAACTAATGTTTCTAATGATATTCTAAGCCAAAATGTTAAGAAAGATAAAGGGAAAGGGCTCCAAAAAACAATTGTTGGCAGAAAAAGGAAGCAAAAAAATGTAAAAGACAACACAATTGTTTCAGATAAAGAACATGTTTCTGCAAAGGATAAGTGTAGTAGTGGATCCAAACCTATCAATGTAGAGGTACATAATTTAAATGAGCCCCAGCAGTCTGTAAATCCTGGTGTGCAGTCTGTAAATCCTGGTTTTCAGTCTGTAAATACTGGTGTGCACTCTATAAATCCTAGGATGCAGTCCATTGTACCCCCTATTCATATTCCTGCATATGGCTATGGCACATACACACATGGGGTTCCCATGTATCCAGAAATGGGTGGAGCACCTGTCTACCCTCAAAATATACAAATCCATATTTTCCCCCAAGTACCTCAAAATCAGTATTTCAATTCAATTCCAAATGTGTCATCTTGGAATGGTTTGCTTCAATAA	2076	0.3829	MDIFEDKSTVNLDQDKDPNFDVSFGDNCSGENNDDSCDGEGNDVSCSGEDIDDSCSEEDFCIGDEKEKDTEEKVKVGELEKRILDLTADDILSLEFGSEELAFAFYESYAKALGFVVRKDDVKKDIRGQIIMRQYVFNKEGLRKKKHFMRLDRKRDHRPITRTKCNAKLRIHYHQRSSKWRVVSFEECHNHELTPAKFVHLIPAYRKMADADKAQVDSLHSFGVRTCHIMGYLVSRKGGYGGVGFTRKDLYNYLDCKTHMKIKDGDARAALSYLQGKADNGGTLVARYQNTRDVVTDGGGAMREAIRHVFPESLHHLCAWHLHNNACENVKHPAFLEDFKTAIWVSKTYENRRLWATAYLRDKFFGRIRTTSQCEAINSVIKVLFESRGIPCSHIISVMKNEHMEHIPSNLILSRWTKNAKRDVLYSSQSDETDDELGNTIRYSAFISACNSLFESGGKKRGCFSELVDDIHKLTLKYKTYGAQHSSQSDPAKNIGEPTMVKTKDDNELSIPADCEPEVRDCDDSMAQTNVSNDILSQNVKKDKGKGLQKTIVGRKRKQKNVKDNTIVSDKEHVSAKDKCSSGSKPINVEVHNLNEPQQSVNPGVQSVNPGFQSVNTGVHSINPRMQSIVPPIHIPAYGYGTYTHGVPMYPEMGGAPVYPQNIQIHIFPQVPQNQYFNSIPNVSSWNGLLQ	691

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi53g00076	691	MobiDBLite	consensus disorder prediction	483	511	-	-
	Sebi53g00076	691	PANTHER	OS01G0519700 PROTEIN	382	457	-	-
	Sebi53g00076	691	Pfam	FAR1 DNA-binding domain	105	194	IPR004330	-
	Sebi53g00076	691	MobiDBLite	consensus disorder prediction	1	43	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi53g00076	Sebi-Chr53	1443657	1446939	Dispersed/Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Sebi53g00076		FAR1	7.1e-20	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi53g00076	-		-	vvo:131613837	316.235