Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi53g00064 ATGGATGATGATGTGTTGAACATGCCCAATTGGGGTTATTATGAGCCCTTCAAAGGGGGACATCTCGGTCTGCAGCTCATGCCTAGCATGGCAGATCGTGACACAAAACCATTTTTCCCTGGTCGTGATCCAGCTATGTTAGTAGGTGCAAATGGAACTTTTCATCCTCGAGATTGTGTTGTTTCGGAGTCGCCAATTCCAATAAGCTATGTCAGAGATAATTGGATAAGCCAGAGGGATAGGATTTTTAATATGCAGCCCACAAATCCTAATTATGCTGTTCTTCCAGAAACATCAGGACCTCCCTCCCTGCAAATGATACAAGCACCTGATACATCAAGAGATGAGAAGGTGGATAGAGTTGAAGAAGTAGTTGTTAAAAAGGAAGGTGGCCAATCAAAGAAAAGGCCAAGTAAGGGTGCTCTCACAACTCCAAAAGCTAAGAAACCTAGGAAGCCAAAGGATAATAGCAATGTTTCAGTTCAACGTGTCAAACCACCTAAGAAGACTATGGAGCTTGTGATAAATGGAATTGATATGGACATTTCTGGTCTACCTGTTCCAGTCTGTTCATGTACTGGGACTCCTCAGCAGTGTTATCGTTGGGGCTGTGGAGGTTGGCAATCAGCTTGTTGTACCACAAATGTGTCAATATATCCTTTGCCAATGAGCATAAAAAGGCGCGGTGCAAGGATAGCTGGGCGGAAAATGAGCCAAGGTGCTTTTAAGAAGGTTTTAGAGAAACTTGCAGCTGAAGGTTATAATTTTGCTAACGCTATTGATCTGAAAACTCATTGGGCTAGGCATGGCACCAACAAGTTTGTTACTATCAGGTAG 837 0.4325 MDDDVLNMPNWGYYEPFKGGHLGLQLMPSMADRDTKPFFPGRDPAMLVGANGTFHPRDCVVSESPIPISYVRDNWISQRDRIFNMQPTNPNYAVLPETSGPPSLQMIQAPDTSRDEKVDRVEEVVVKKEGGQSKKRPSKGALTTPKAKKPRKPKDNSNVSVQRVKPPKKTMELVINGIDMDISGLPVPVCSCTGTPQQCYRWGCGGWQSACCTTNVSIYPLPMSIKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANAIDLKTHWARHGTNKFVTIR 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi53g00064 278 MobiDBLite consensus disorder prediction 94 166 - -
Sebi53g00064 278 MobiDBLite consensus disorder prediction 94 110 - -
Sebi53g00064 278 Pfam GAGA binding protein-like family 1 278 IPR010409 -
Sebi53g00064 278 MobiDBLite consensus disorder prediction 112 135 - -
Sebi53g00064 278 SMART GAGA_bind_2 1 278 IPR010409 -
Sebi53g00064 278 PANTHER - 1 278 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi53g00064 Sebi-Chr53 1274689 1275525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi53g00064 1 278 BBR or BPC Transcription factor family AT2G01930 58.923 2.47e-110 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Sebi53g00064 GAGA_bind 2.1e-105 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi53g00064 - - gmx:100791533 499.975