Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi53g00054 ATGGCAATGGACGCGCATCTCCGTCTTCCTTCATCAGACGACGTCGTTCTCAACGTCGACTCTTCTGCTCACAATGTCACCGTGAAGGAGAAAAGAGACACTTTGCTTCTTGCATATAGGACACTGGGTGTGGTATTTGGAGGTCTTGTGACGTCACCCCTTTATGTGTACCCTTCAATGCCACTCAAATCTCCAACAGAAGAAGACTATTTGGGTATTTACAGCATCATGTTTTGGACTCTTACTCTTATTGGGGTTGTCAAATATGCCAACATTGCCCTCAAAGCTGATGACCACGGTGAAGGTGGGACTTTTGCCCTGTATTCATTACTTTGCAGGCATTTCAATATTGGAATCTTGCCTTCTAAACAGCATCTCGGTTTAAACTCAACTAGGACCACTCAAACACACACCTGGCTTGCCAAATTGTTTGAAAAAAGCTTGGTTGCTCGAAGGATCTTGCTTTTTGTTGCCATGTTGGGTACTTGTATGCTTATTGGTGATGGTATACTTACCCCTGCAATTTCAGTGTTGTCAGCAATGGATGGAGTCAGAGCACCTTTTCCTTCAGTTAGCAAATCACTAGTAGAAGCACTCTCTGCAGTTATCTTGATCTTTCTGTTCTTGTTGCAAAAATTTGGTACATCCCGCGTCAGTTTTCTCTTTTCCCCAATAATGGGCGCGTGGACCCTGTGTACTCCACTTGTTGGAATTTACAGCATCATACACCACTATCCAAGTATATTCAAGGCTTTATCCCCACACTACATTTTCCGTTTCTTTTGGAGAAATGGGAAATCCGGGTGGCTTTTACTTGGTGGTACTGTCCTTTGCATTACAGGTTCTGAGGCGATGTTTGCTGATCTTGGTCATTTCAATCCACGATCCATTCAGCTAGCTTTCCTATTCACAATCTACCCATCTTTAGTTCTGACTTATGCGGGACAAACAGCATACTTGATCAAGAATCCCAATGATCATGATGATGGCTTTTATAAATTTATACCCACAGCAGTCTACTGGCCTATCTTTGTTATTGCAACATTGGCCGCAATTGTTGCTAGCCAGTCATTAATATCGGCCACTTTTTCTGTTATCAAGCAATCTGTAGTGCTAGATTATTTTCCTCGAGTAAAGATTGTACACACATCTCATAATAAAGAAGGAGAGGTTTACTCCCCTGAAGTGAACTACATTCTGATGGTCCTCTGTGTTGCTGTCATACTTATTTTTGGAGATGGAAAAGATATTGGAAATGCTTTTGGTGTTGTTGTGAGCCTAGTGATGCTCATCACCACTATACTACTTACACTAGTCATGATCATGATATGGAGAACTCCTGTCGCGCTGGTTGCCCTGTACTTCTTGGTGTTTTTTGTGATGGAAGGGGTTTATGTCAGTGCAGTTTTCACTAAATTTGCTGAAGGTGGATGGATTCCTTTTGCCATATCACTTATCCTTGCCTTCATCATGTTTGGTTGGTTTTATGGCAGACAAAGAAAGGTAGATTATGAGGTAACCCACAAGATAACCTTTGAGAGACTCCAAGAGCTTTTAGCTGACTGCAGTGTTCAAAGGGTTCCTGGATTATGCTTCTTTTATACTAACATTCAAGATGGATTGACTCCTATTCTTGGACACTACATAAAGAACATGAAATCCCTTCATAAGGTCACAATATTCACAACTCTTAGATATTTGTTAGTCCCCAAGAAGTTCCCTGATAACCTTTCATCTGAATCTCAAGAGATTGGAGAAGAGGTTTCCAGTTTAAAAGAAGCACGTTGTGCTGGGGTTGTTCATGTCCGTGGAAAGACAAGATTTTACATTGGCCTCAACTGTGGCTGGTTTGATAAAATCATGCTTAGTTTTTATGAAGTCATGCATAGTAACTGTAGATCTGGCCTTCCTGCTTTAGGGGTTTCATTACAGCAAAGGATTGAAGTTGGAATGCTCTATGAGGCTTGA 1968 0.4146 MAMDAHLRLPSSDDVVLNVDSSAHNVTVKEKRDTLLLAYRTLGVVFGGLVTSPLYVYPSMPLKSPTEEDYLGIYSIMFWTLTLIGVVKYANIALKADDHGEGGTFALYSLLCRHFNIGILPSKQHLGLNSTRTTQTHTWLAKLFEKSLVARRILLFVAMLGTCMLIGDGILTPAISVLSAMDGVRAPFPSVSKSLVEALSAVILIFLFLLQKFGTSRVSFLFSPIMGAWTLCTPLVGIYSIIHHYPSIFKALSPHYIFRFFWRNGKSGWLLLGGTVLCITGSEAMFADLGHFNPRSIQLAFLFTIYPSLVLTYAGQTAYLIKNPNDHDDGFYKFIPTAVYWPIFVIATLAAIVASQSLISATFSVIKQSVVLDYFPRVKIVHTSHNKEGEVYSPEVNYILMVLCVAVILIFGDGKDIGNAFGVVVSLVMLITTILLTLVMIMIWRTPVALVALYFLVFFVMEGVYVSAVFTKFAEGGWIPFAISLILAFIMFGWFYGRQRKVDYEVTHKITFERLQELLADCSVQRVPGLCFFYTNIQDGLTPILGHYIKNMKSLHKVTIFTTLRYLLVPKKFPDNLSSESQEIGEEVSSLKEARCAGVVHVRGKTRFYIGLNCGWFDKIMLSFYEVMHSNCRSGLPALGVSLQQRIEVGMLYEA 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi53g00054 655 Pfam K+ potassium transporter 39 573 IPR003855 GO:0015079|GO:0016020|GO:0071805
Sebi53g00054 655 NCBIfam potassium uptake protein 37 572 IPR003855 GO:0015079|GO:0016020|GO:0071805
Sebi53g00054 655 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 29 571 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi53g00054 Sebi-Chr53 981660 985779 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi53g00054 22 576 Inorganic Solute Cotransporters AT5G14880 46.021 3.47e-165 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi53g00054 K03549 - gmx:100783944 1095.88