LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi53g00050	ATGACGAAATCTGAATTTGCCGTAGACATTATCTCGGATGATGATAAGGATCCAATCTTTCATTCTATCAGTGAATCTGATGATTTAAATGGTGGAGAGGAACATGATTTTTGTGACAAGACTAACAAAGAAGAGATTGGTTCACGGGATGATCAAAGCCAGAAAGATGACGTTACGAGGGATATTAGGGGTAATGTTATTATGAGGCAGTTTGTTTGCAATAGGGAGAGACTAAGAAATAAAAAGCACTTTATGAGAGTGGATAGGAAGAGAGAACATAGGCCACTTACCCGTACAAGTTGTCAAGCCAAGCTTCGTGTTCACTACCATCACAATAGTTTAAAATGGAAAGTAGTATCATTTGAGCAGTGTCATAACCATGAGCTTACTCCATCTAGATATGTTCACCTACCCCCTGCTTATCGTGGGTTAACAGATTGTGATAAGGCGCAGGTTGATCGTTTGCATGGTCATGGTCTTAGAGGTTGTCATATCATGGGCTACCTGGTGGCTCAAAAGGGGGGTTATTGTCGTGTAGGTTTTACAAAGAAGGACATGTACAACTATCTTGACCGAAAAAATCAAGCATATGTGAAAAAAGGTTATGTACGTGCTGCCTTGAGTTACCTACAAGATTTCAAGAGAGCAATGTACTCCAATTTCACTCCGACTGAATTTGATGAGTTTTGGAAGAAAAAGGTGGTTGAACATGGTTTGGAAGGAAACAAATGGGTGTCGAAAACTTATGAAAATAAGGAATTATGGGCAACTGCATATCTTAGGGATAAGTTCTTTGGACGTATAAGGACTACATCTCAATGTGAATCCATTAATTCTTTTATTAGGTCATATTGTAAGAAGAAAAGTAGCATGGTTGAATTCTTGCACAAGTTTGAGCAAGCGAAGAATGAGTACAAAAATAATGAGTTAATGGCTGATTTTAAGACTTTATTTTCGGAGCCGGTTCTAACTACATATCTTCGTAGCATTGAGAAAGAGGCTTCTAATATTTACACTCAAGAAATTTTCAGAGAAGTTAAGCAAGAGATTGAAAAGGCCAATGCCTTAATGGTTTGTGAAAGATCAATGTTGGATGACCATGTTATGTTCAGTCTTAAAAAGTTTTGCTCCCCTGGGATCCCATGTTCCCATATTATAACTGTCATGAGAAATGAGGATATGGAAAACATTCCTAAAAGTTTGATATGCAAACGTTGGTTGAAGACTGCTAAAATTGATTTAATGTCCCATTATGATGATGATGAAACGGATAGTGACGTGATGGAGGAAGCTTGTTATGCTGCCGTTAGTGCTGCATGTAACAACTTTGCAAAGGTAGCTTCAAAAAAAAGAAATTACTTAAAAGAGATACTTGAAGACATTCGGAAGCTGACAATAAAGTATGAGAAATTGGAGGATAAGGTTTGCAAAGATGGTAACCCAACAGTTGAAGAAGTGGGTGATCCTAGCACGGTGAAAACTAAAGAAAAAGCTGAAAATTGTGAACTGCCTCCTATGGTCCCTAAGGGAAAGGAAATGAGTCAAGAGAAGAAAGCAAAGCATTCTAAGGAACCGGCATACAATATAGCATCATCTTCAAAAGGAGTAAAATTTGAAAATTCTCAAGTGTCACCTCCAGTCCAGCCTATGGCCCCGCCCATGCATTTTCCTAGTAATGGGTATGGAAGCTTCAATCAAGGGTATCCAATATTTCCAAACTTTAGTGGTAGCCCGATTCAGACTCAACATAATGCAGTCCCTGTTTACGGACACAATATGCATTATCCTTTCTACCACCATAATGATCAACTTCCAATTTATCCGCAAGGACCCCAGGTAATGAAGAGTGGCGATCAAAGAAGTGGATATGAAGAAAAACGTTAA	1884	0.3848	MTKSEFAVDIISDDDKDPIFHSISESDDLNGGEEHDFCDKTNKEEIGSRDDQSQKDDVTRDIRGNVIMRQFVCNRERLRNKKHFMRVDRKREHRPLTRTSCQAKLRVHYHHNSLKWKVVSFEQCHNHELTPSRYVHLPPAYRGLTDCDKAQVDRLHGHGLRGCHIMGYLVAQKGGYCRVGFTKKDMYNYLDRKNQAYVKKGYVRAALSYLQDFKRAMYSNFTPTEFDEFWKKKVVEHGLEGNKWVSKTYENKELWATAYLRDKFFGRIRTTSQCESINSFIRSYCKKKSSMVEFLHKFEQAKNEYKNNELMADFKTLFSEPVLTTYLRSIEKEASNIYTQEIFREVKQEIEKANALMVCERSMLDDHVMFSLKKFCSPGIPCSHIITVMRNEDMENIPKSLICKRWLKTAKIDLMSHYDDDETDSDVMEEACYAAVSAACNNFAKVASKKRNYLKEILEDIRKLTIKYEKLEDKVCKDGNPTVEEVGDPSTVKTKEKAENCELPPMVPKGKEMSQEKKAKHSKEPAYNIASSSKGVKFENSQVSPPVQPMAPPMHFPSNGYGSFNQGYPIFPNFSGSPIQTQHNAVPVYGHNMHYPFYHHNDQLPIYPQGPQVMKSGDQRSGYEEKR	627

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi53g00050	627	Coils	Coil	454	474	-	-
	Sebi53g00050	627	MobiDBLite	consensus disorder prediction	16	60	-	-
	Sebi53g00050	627	Pfam	FAR1 DNA-binding domain	62	130	IPR004330	-
	Sebi53g00050	627	PANTHER	PROTEIN FAR1-RELATED SEQUENCE 10-RELATED	202	443	IPR031052	GO:0006355
	Sebi53g00050	627	MobiDBLite	consensus disorder prediction	607	627	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi53g00050	Sebi-Chr53	910434	913970	Dispersed/Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Sebi53g00050		FAR1	4.8e-12	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi53g00050	-		-	vvo:131593365	320.857