Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi53g00029 ATGAGTTCACTGTCACCATACTCACTTGGGACTTGCCTTTCTTCCCTACAACCCCAAAAAATTAGTAACAACTATTCAGCACCTAAATCATCACCCCTTAGTTACATAACATGTGCTGTCCAAGTCAAACCACTAGCAGTGGCACAAAACGAGAGGCAATTCAAGAGAAGAGATGCAATAGGCCTTGCCTTGAGTTTTGGCCTTCTTCATTCTTTCTTGCAACCACAACCCACATCAGCAGCAGAAACAGTTCCATGTGAATTACAATCAGCTCCTTCAGGCCTTGCCTACTGTGATAAACTTGTTGGCACAGGTCCTCAAGCTGTTAAGGGACAGCTTATTAAAGCACATTATGTTGGGAGATTGGAGAATGGGAAAATTTTCGACAGCAGCTATAATCGTGGCAAGCCACTCACATTTCGTGTGGGTGTTGGAGAGGTCATCAAAGGATGGGATGAAGGCATTCTAGGAGGTGATGGAGTTCCTCCCATGCTTGCAGGAGGGAAACGTACACTGAAGATTCCTCCAGAACTTGGATATGGCTCCAGAGGGGCTGGTTGTAGAGGAGGCAAGTACTCTTTCCTTTCTTTTGTCTGCTAA 600 0.4533 MSSLSPYSLGTCLSSLQPQKISNNYSAPKSSPLSYITCAVQVKPLAVAQNERQFKRRDAIGLALSFGLLHSFLQPQPTSAAETVPCELQSAPSGLAYCDKLVGTGPQAVKGQLIKAHYVGRLENGKIFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPPMLAGGKRTLKIPPELGYGSRGAGCRGGKYSFLSFVC 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi53g00029 199 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 111 199 IPR001179 GO:0003755
Sebi53g00029 199 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 106 185 IPR001179 GO:0003755
Sebi53g00029 199 FunFam Peptidylprolyl isomerase 83 196 - -
Sebi53g00029 199 Gene3D - 82 198 IPR046357 GO:0003755
Sebi53g00029 199 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC 83 191 IPR044183 GO:0009507
Sebi53g00029 199 SUPERFAMILY FKBP-like 89 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi53g00029 Sebi-Chr53 592926 594298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi53g00029 111 185 Calmodulin-binding Proteins AT5G48570 45.333 2.20e-13 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi53g00029 K01802 - gmx:100778390 244.973