Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi53g00018 ATGTTGTGTAGTAAGGCACTATCTGAACGATCTATTAACTATGCCCTGCGGCTAGAGAATGAAAAGATACAATCAGAAAACATCCAATTAAGAGAGACTTTAAAGAAGTTGCCTTGCTTGTCTTGTGGGGGTCCAATCTTAGTGGAGGAAGATGATCACGAGACTTGTATGGAAAAGTTAAGGTTGGAAAATGCATGGTTACTTCAACAGCATGAGAAATTATCCAAGCTTTTGGCAAGCAAAAACGATGAGGAAAATCCAATTTTGCAACCTACCCTTACATCTTCCCATGATCCACCACAAGAAAGTTTGCTAAACCAAAATGTTGAAATTCCTACTCTTGAGATAAATCCAATAGTGCCTTCTACTATTCCATCTTCATCCCAACATGATCCATCACATGGAAGTAATTTGCTAAACCAAAACATTGAAAACCCTACTCATGATATAAATCCAATTGTATCTTCTACCCTTCCATCTTCACCAAAGCATGATCCATCACATGGAAATTTTCCAAACCAAAACATTGAAATTCCTTCTCCTATGATGATAGATCCAATCCTGCCTCCTACCCTTCTATCTTCAAATGATCATCCCTTACAAGGAAGTTTGCTAAACCAAACCTTTCCAATTCTACTTCAAACCCTTCCATCTTCAAATGATCCTTTACAAGGAAGTTTGTTAAACCAAAACATTGAAACCCTTGCTATTGATCATCAAAACATTCCTACCATTACTTCCCTTGACCAAAATGTTTCTAATATTACTCCTGAGCCTAATCAGAATGTTCCTGCCCATGATAATGAAGATATTTATGCCTTTGATGAGGATTTTCCTGTTGTTGGTCTAGATTTTGATGCACTTGAAGGAATTTTGGATGATTGTGAGTGGCCTCAGCCAATGAGCACAGATATAGAAAAAGTTTTAATGACTGAGATTGCAAATACTGCTATGGAAGAATTAACAAGGCTTTTGCGTATGAATGAGCCTCTTTGGTTTAGGTCTATGAAAGATGAGAAATTCATTCTTCAGCGTGAAACCTATGAAAAGATATTTCATAGGTTTAGTCGCTTAAAGGGACATATAGAGTCATCAAAAGATTCACGAATAGTGAGCATGGGTGGAACACAATTGGTTGAAATGTTTTTAGATTCGGACAAATGGGTTGATCTTTTCCCAACAATTGTTAGAAAAGCACAAACAATCCAAGTATTTGAAAGCGGATTGTCAAGAAGCCGAAATGGAGCTTTGCAATTGATGAATGCAAAAATGCACATTCTTTCAAAATTGATTCCTTCTCGAGAATTCATCTTCCTTCGTTATTGTAAACAAGTTGAGGAAGGTGTGTGGGTGATAGCAGATGTGTCATTTGATTCCTTAAATTACGAAGAGATTCTTTCTCATACTTGGAGGTTCCCCTCTGGATGCATGATTCAGGAAATTTCGGATGGATCTTGCATGATTTCTTGGGTCGAGCATGTAGAAGTAGATGATAAGATCCAAACTGACCGAAATGAAGTTATTTGTGAAGAAAATGCATATGGAGCAGAAAGATGGGTTTTGACACTTGAAAGAACGTGTGAAAGATTCACACGCACACTTGAAACTATTCCTAGTTCGGATGCTAGAGGAGTGATCAATTCAGTTGAAGGAATGAGGAGCGTGATGCAGCTTGGTCATCGTATGATTAAGCTTTATCATGGAATTTTTGACATGTCAAGTAATGTGGACATATTGAAAAATGGCAAGGTTAGGATATTTGTTCGAAAAAACACAGAGCTAGGACAACCAAAAGGCATGATTGTCAGTGCTGCTACCTTCTTTCGACTTCCTCTATCTCCTCAAAATGTTTTGGACTTCTTGAAAGATATTAGTAAACGACCTCAGGTTCACATGCTAAAGTTTGCATATGTTTTATTGATGCCTTTCATCCCTAAAGAGAATGCTATATTGATTCTACAAGAAAGTTATATGGATCCATTGGAGTCAATGGTGATATATGCTCCTATGGATATAGAAACATTGAATTATGCAATAAAGGGAGGAGACTCATCACCATTGCCTCTTCTTCCCTCTGGCTTTACCATAACAAGGGATGGTCAACCAAATGTTGTTGGGGGACAATCTGGAGGTTCATTAGTAACTGTTGGGTATCAAATTCTAGCTTGCAGTGCAATGGAGGACTTAAACATGGAAAACTCGGTGGCATTTGTCAATACACTTGTCACCTCAACAGTGAAGAAAATTAAAGTTGCTTTGAGTTGTTGA 2268 0.377 MLCSKALSERSINYALRLENEKIQSENIQLRETLKKLPCLSCGGPILVEEDDHETCMEKLRLENAWLLQQHEKLSKLLASKNDEENPILQPTLTSSHDPPQESLLNQNVEIPTLEINPIVPSTIPSSSQHDPSHGSNLLNQNIENPTHDINPIVSSTLPSSPKHDPSHGNFPNQNIEIPSPMMIDPILPPTLLSSNDHPLQGSLLNQTFPILLQTLPSSNDPLQGSLLNQNIETLAIDHQNIPTITSLDQNVSNITPEPNQNVPAHDNEDIYAFDEDFPVVGLDFDALEGILDDCEWPQPMSTDIEKVLMTEIANTAMEELTRLLRMNEPLWFRSMKDEKFILQRETYEKIFHRFSRLKGHIESSKDSRIVSMGGTQLVEMFLDSDKWVDLFPTIVRKAQTIQVFESGLSRSRNGALQLMNAKMHILSKLIPSREFIFLRYCKQVEEGVWVIADVSFDSLNYEEILSHTWRFPSGCMIQEISDGSCMISWVEHVEVDDKIQTDRNEVICEENAYGAERWVLTLERTCERFTRTLETIPSSDARGVINSVEGMRSVMQLGHRMIKLYHGIFDMSSNVDILKNGKVRIFVRKNTELGQPKGMIVSAATFFRLPLSPQNVLDFLKDISKRPQVHMLKFAYVLLMPFIPKENAILILQESYMDPLESMVIYAPMDIETLNYAIKGGDSSPLPLLPSGFTITRDGQPNVVGGQSGGSLVTVGYQILACSAMEDLNMENSVAFVNTLVTSTVKKIKVALSC 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi53g00018 755 ProSiteProfiles START domain profile. 303 532 IPR002913 GO:0008289
Sebi53g00018 755 CDD START_ArGLABRA2_like 307 528 - -
Sebi53g00018 755 SMART START_1 312 529 IPR002913 GO:0008289
Sebi53g00018 755 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 5 753 IPR042160 -
Sebi53g00018 755 Pfam START domain 312 529 IPR002913 GO:0008289
Sebi53g00018 755 MobiDBLite consensus disorder prediction 119 180 - -
Sebi53g00018 755 SUPERFAMILY Bet v1-like 302 502 - -
Sebi53g00018 755 Gene3D - 310 504 IPR023393 -
Sebi53g00018 755 MobiDBLite consensus disorder prediction 119 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi53g00018 Sebi-Chr53 303776 308728 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi53g00018 283 755 Homeobox Transcription Factor Family AT1G17920 40.310 6.97e-104 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi53g00018 K09338 - gmx:100783586 551.592