Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi539g00014 ATGGCTTGGTTTGAAACTGGAGTTGCAGATTCTTATGGTGATCCTGCTTGGGGTTCAAGGACTCCAGTGAGCTCTACTTTCAGCTTTAAAGGTGCAAGCTCCAATGATGCCATTGGGCATGAGAATCAACTTGAATCAACATACCTTTATACAAATGGAGTACTGTCCCAGTTGGAGCATCCCTCAAGGAAAATTTGCTATGCTGTCGGAGGCTTGGATCAATTGCTTGTGACTAGGCATTCAAACTGTCTATATACTAATACAATGGTAAAAGATGAGGTGATGTCTGCCAAGTTCTTGAAGTTGGAGCAGCTGGATCAAGATCTAGGCCATCCTGCTGATACAGCTGGAGTTTCCATTGATGGCACTGGACAAGTTGGGACATATTTCTATACAGCTCCTCCTGAAATTGAGCAAGGATGGCCGAAGATTGATGAAAAGGCTGATATGTACAGCTTAGGAGTGGTTTTCTTTGAGCTTTGGCACCCATTTGGGACAGCAATGGAGAGACATGTTGTTTTATCTGATCTGAAACTGAAAGGGGAACTTCCACCTACTTGGGTTGCTGAGTTTCCAGAACAGGAATCCTTGCTGCGGCGGTTAATGTCTCCAGGTCCTTCAGATCGCCCTTCAGCTACAGAACTTCTGAGAAATGCATTCCTCCACGAATGGAGTCTGAATTATTGGATGGCAAATATTCTACGAACAATGCAGAAATCAGAGGATACAAGCATATATGATAAAGTTTTAAATGCTATCTTTGATGAAGAGATGTTAAGAACAAAACACATTCGTCAGGTTGGTAGATTGGGGTCAGTTGGAGATAACAGTTCATCCATTCAGTACACAGATTTGGTAACTGAAGTTCGAGATTATGTCGTAGATATCAACAGGGAAATTTTCAAAACAGCATTGTGCAAACATCTAGAAATATCAACAATGCGATTATTGGATGATTCTCCACAATTTAATAGAAGAGCAGTTGGACATTCATCACCAAACCGCTACCTTCAGGGAGATTTTGACATTGTTGGTGGTACCTCAGCATTGACAGAGGCAGAGGTCATAAAGGTCACAAGGGACATAGTCACTTGTTTTTTCCATGCAGACTCATGTGACATTCATCTAAACCATGCTGACCTCCTGGATGCAATTTGGTCATGGATTGGAGTCAAGGTAGAACATAGACTTAAAGTAGCAGAGCTTCTTTCAATGATGGGTTCTTTGCGTCCACAATCCTCAGAAAGGAAATCAAAATGGGTAGTGATAAGGCGGCAGCTCTTGCAGGAACTGGATTTAGCAGAAGCTATGGTAAATAGGTTGCAGACAGTGGGTTTAAGATTCTGTGGTTCTGCAGATCAGGCACTTCCCAGACTAAGAGGAGCTCTTCCATCTGATAAACGTACATTCAAGGCACTTGATGAATTGTCTGAACTTGTCAGTCTCTTGAGAATTTGGAGGATTGACAGAAATGTATATATAGATGCATTAATGCCGCCAACTGAAAGTTATCACAGAGATTTGTTTTTCCAGGTATACTTAAGGAAGGAGAACACTGCTGGATCACTCTCTGAAGGTGTCTTGCTGGCTGTTGGTGGTCGATATGACTTCTTGCTTCATCAGTTGTGGAGTAGTGACTATAAAGGAAATCCTCCAACTGGTGTGGGGACTAGCCTTGCACTAGAGACAATCATTCAGAATTGTCCTGTAGATTTTAAGCCCAATAGAAATGAAGTCAGCACCAATATTCTTGTCTGTTCAAGAGGAGGAGGTGGTCTGTTGGTGGAGCGCATGGAACTCGTTGCTGAATTGTGGGAGGAGAACTTTAAGGCTCAATTTGTTCCCACCCCTGATCCTAGTCTTACAGAACAGTATGAGTATGCTAATGAACATGATATCAAATGTCTCGTCATTATCACAGATACAGGTTTCTCCCTGGCAGATTCAGTTAAGGCCTTTGGAAGCTTTTGGCCTGTGGCAACATAA 1986 0.4245 MAWFETGVADSYGDPAWGSRTPVSSTFSFKGASSNDAIGHENQLESTYLYTNGVLSQLEHPSRKICYAVGGLDQLLVTRHSNCLYTNTMVKDEVMSAKFLKLEQLDQDLGHPADTAGVSIDGTGQVGTYFYTAPPEIEQGWPKIDEKADMYSLGVVFFELWHPFGTAMERHVVLSDLKLKGELPPTWVAEFPEQESLLRRLMSPGPSDRPSATELLRNAFLHEWSLNYWMANILRTMQKSEDTSIYDKVLNAIFDEEMLRTKHIRQVGRLGSVGDNSSSIQYTDLVTEVRDYVVDINREIFKTALCKHLEISTMRLLDDSPQFNRRAVGHSSPNRYLQGDFDIVGGTSALTEAEVIKVTRDIVTCFFHADSCDIHLNHADLLDAIWSWIGVKVEHRLKVAELLSMMGSLRPQSSERKSKWVVIRRQLLQELDLAEAMVNRLQTVGLRFCGSADQALPRLRGALPSDKRTFKALDELSELVSLLRIWRIDRNVYIDALMPPTESYHRDLFFQVYLRKENTAGSLSEGVLLAVGGRYDFLLHQLWSSDYKGNPPTGVGTSLALETIIQNCPVDFKPNRNEVSTNILVCSRGGGGLLVERMELVAELWEENFKAQFVPTPDPSLTEQYEYANEHDIKCLVIITDTGFSLADSVKAFGSFWPVAT 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi539g00014 661 ProSiteProfiles Protein kinase domain profile. 1 221 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi539g00014 661 SUPERFAMILY Protein kinase-like (PK-like) 122 271 IPR011009 -
Sebi539g00014 661 SUPERFAMILY Class II aaRS and biotin synthetases 315 566 IPR045864 -
Sebi539g00014 661 PANTHER HISTIDYL-TRNA SYNTHETASE 325 645 - -
Sebi539g00014 661 Gene3D - 578 648 IPR036621 -
Sebi539g00014 661 Gene3D Transferase(Phosphotransferase) domain 1 79 231 - -
Sebi539g00014 661 SMART serkin_6 11 221 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi539g00014 661 Pfam Histidyl-tRNA synthetase 315 564 IPR041715 -
Sebi539g00014 661 FunFam Histidine--tRNA ligase, cytoplasmic 578 652 - -
Sebi539g00014 661 Gene3D Bira Bifunctional Protein; Domain 2 284 568 IPR045864 -
Sebi539g00014 661 Coils Coil 424 444 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_GCN2 Sebi539g00014 tRNA-synt_His 7.3e-11 CL0040
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi539g00014 K16196 - gmx:100797996 1019.99