Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi538g00036 ATGTCCATGATCCTGTCTATTTGCAAAAGCACTGGCAGCACAGAACAGATCTCATACTATGAGGTCTACATGGACCGATGTTATGACCTCTTGGAGGTCAAAGCAAAAGAAATTTCAGTTTGGGATGACAAAGATGGGCAAGTTCATCTCCGGGGACTATCTCAGGTTCCTATAAACACTATGTCTGAATTTCATGAAGTTTTCTCCTGTGGAGTTCAGAGACGTAAAATTGCACACACAGGCCTCAATGATGTCTCCAGTAGAAGTCATGGAGTGCTTGTGATATCTGTATCCACTCCTTCTTCTGATGGAACTGCAAGCACCACGTGTGGAAAGCTGAATCTCATAGACTTGGCAGGTAATGAAGACAACAGAAGGACCTGCAATGAAGGGATTCGTCTCCAAGAGTGCCAAAATAAACCAATCCTTGTTTAA 435 0.4322 MSMILSICKSTGSTEQISYYEVYMDRCYDLLEVKAKEISVWDDKDGQVHLRGLSQVPINTMSEFHEVFSCGVQRRKIAHTGLNDVSSRSHGVLVISVSTPSSDGTASTTCGKLNLIDLAGNEDNRRTCNEGIRLQECQNKPILV 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi538g00036 144 Pfam Kinesin motor domain 16 139 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi538g00036 144 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 139 IPR027417 -
Sebi538g00036 144 ProSiteProfiles Kinesin motor domain profile. 1 144 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi538g00036 144 ProSitePatterns Kinesin motor domain signature. 111 122 IPR019821 GO:0003777|GO:0005524|GO:0007018
Sebi538g00036 144 PRINTS Kinesin heavy chain signature 80 97 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi538g00036 144 PRINTS Kinesin heavy chain signature 112 130 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi538g00036 144 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 16 137 IPR027640 GO:0003777|GO:0007018
Sebi538g00036 144 SMART kinesin_4 1 140 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi538g00036 144 Gene3D Kinesin motor domain 3 141 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi538g00036 Sebi-Chr538 670965 671480 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi538g00036 21 139 Calmodulin-binding Proteins AT5G65930 34.959 3.43e-16 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi538g00036 K10403 - gmx:100804591 252.292