Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi538g00033 ATGTCAAACTTGTGTTACATTTTCTGCATGGAGAAAGTTAATATTCCTGCTTTGAAATCCTTCATAACCATAGAAGGTGCTGGTGCAGATAAAACCATTGTTCAATGGAATGACACTGCTCAAACACCTGGGCCAAGTGGGAAACCATTGGGAACCATTGGAGCCAATTGGAAAACAAGCAGTGGCATTCAGGATTTCAGCAGACACAGCAGCATTCTTGGGCTGCAAATTCTTAAGGAGCACAGGACACACTGGATGTCACGTGCATGCCATAGCACAGAATACAGGGGCCTAACAGCTCAAGGAAGAAGCAGTATGTTGGAAGACACGGGGTTCTCATTTGTGAACTGTAAGGGTCACGGGGGTCAGGGGCACGATACCTTGGAAGGGCTTTGGGGTCCTTTTTCTCGCGTGGTCTTCGCCTATACCTATATGGACAACATCATCATTTCCCAAAGGATGGTATAA 468 0.4615 MSNLCYIFCMEKVNIPALKSFITIEGAGADKTIVQWNDTAQTPGPSGKPLGTIGANWKTSSGIQDFSRHSSILGLQILKEHRTHWMSRACHSTEYRGLTAQGRSSMLEDTGFSFVNCKGHGGQGHDTLEGLWGPFSRVVFAYTYMDNIIISQRMV 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi538g00033 155 Gene3D - 6 66 IPR012334 -
Sebi538g00033 155 Gene3D - 72 154 IPR012334 -
Sebi538g00033 155 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 94 152 - -
Sebi538g00033 155 SUPERFAMILY Pectin lyase-like 10 150 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi538g00033 Sebi-Chr538 628952 630810 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi538g00033 8 149 Carbohydrate Esterase AT5G47500 27.500 9.22e-12 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi538g00033 K01051 - qsu:112033938 132.88