Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi538g00014 ATGTGTGTTCTTACAAAGGAGTCTTCTGTGCAAATCCTCAAGATGAAATGGGTTTCATCAGCTGTCCCAGTTGTTGCAGGCATAGATCTCAACCATGCAAATCTTCAAGGAACTCTTGTCAAAGATCTCTCTTTGCTCACTGATATGTCTCTTCTCCACCTCAACAGTAATAGATTCACTGGCACTGTTCCTGATACATTCAGGGACCTCATGTCTTTGGAAGAGTTAGACCTCAGCAACAACCAACTTTCTGGGCCCCTCCCTCAAGAACTTTTCAATAAGAACCTGGATGCAATATTTGTCAACAACAATCAATTTGAAGCAAGTTTTGGTTTCATGGGTTCTAAGATAAAGGAGATTCTGTTCCTCAATAACCAGTTAACTGGCTGCATTCCTGAAGGAGTGGGGCTCTTCACAGAGATGCAAGTTCTGGATGTGAGCTTCAATGCACTTATGGGTCATTTGCCAGACACACTATCTTGCCTGCAAGATATAGAAGTCCTGAATTTGGCACATAATCAGCTTTCTGGGGAGTTATCAGATATAATCTGCTCTCTGAGAAGCCTTGCTAATCTAACCGTTTCCTACAATTTCTTTTCTGGGTTCAGCCAGCAATGTTCAAGGCTTTTCTTTAGGAATGTGGGTTTTGATTTCTCACTTAACTGTATTCCCGGGAGGAACATGCAGAGACCTCAACCTGAGTGCTCTATGATCCCTGGAGGTTAG 726 0.427 MCVLTKESSVQILKMKWVSSAVPVVAGIDLNHANLQGTLVKDLSLLTDMSLLHLNSNRFTGTVPDTFRDLMSLEELDLSNNQLSGPLPQELFNKNLDAIFVNNNQFEASFGFMGSKIKEILFLNNQLTGCIPEGVGLFTEMQVLDVSFNALMGHLPDTLSCLQDIEVLNLAHNQLSGELSDIICSLRSLANLTVSYNFFSGFSQQCSRLFFRNVGFDFSLNCIPGRNMQRPQPECSMIPGG 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi538g00014 241 Pfam Leucine rich repeat 51 105 IPR001611 GO:0005515
Sebi538g00014 241 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 23 89 - -
Sebi538g00014 241 SUPERFAMILY L domain-like 27 208 - -
Sebi538g00014 241 PRINTS Leucine-rich repeat signature 73 86 - -
Sebi538g00014 241 PRINTS Leucine-rich repeat signature 162 175 - -
Sebi538g00014 241 Gene3D Ribonuclease Inhibitor 6 112 IPR032675 -
Sebi538g00014 241 Gene3D Ribonuclease Inhibitor 113 213 IPR032675 -
Sebi538g00014 241 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 112 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi538g00014 Sebi-Chr538 280610 281488 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi538g00014 24 236 Leucine-rich Repeat extension Gene Families AT3G24480 41.825 1.29e-56 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi538g00014 - - gmx:100775544 382.874