Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi537g00030 ATGAATTCCTCTATGCAATTAACCATTATTACCATTTTGGCATCTTCGTTATTCCTCTGGCATGCTTTTCTGCGAAAGAGGAGGAGTAACAAAGCTGGCATTAGCAAGAGTAAAGAAGCTCCTGTCCCAGCTGGTGCATGGCCAGTTATTGGTCACCTTCACCTTTTAGGTGGTGATAATCAACTTCTCTATCGAACACTCGGAGCAATGGCTGATCAATACGGACCAGCATTTAACATATGGCTTGGTACTCGCCGAGCTTTTGTGGTCAGTAACTGGGAAGTTGCAAAACAATGCTTCACAACCAATGACAAGGCACTTGCCTCACGTCCCAAAACAGTTGCAGCAAAGCATATGGGATACAACTATGCCGTGTTTGGTTTTGCTCCTTATAGCCCCTTTTGGCGTGAAATGAGAAAGATTGCCACCCTTGAACTTCTTTCCAACCGTAGGCTTGAAATGCTTAAACATGTCAGAGTGTCTGAGCTTAACATGGGTATAACGGACCTGTACAACTCTTGGGTCCAAAATGGTTCAAAGCCTGTGATGATGGAACTTAATAGATGGTTAGAGGATTTGACTCTGAATATGGTGGTTAGAATGGTTGCAGGGAAACGTTACTTTGGTGCCTCAGCTACTTGTGATGATGATGAGGCAAGGCGGTGCCAGAAGGCTATTAATCAATTCTTTCATCTAATTGGCATTTTTGTGGTTTCAGATGCGCTTCCTTTTTTGCGTTGGTTCGATTTGCAGGGGCATGAGAGGGCAATGAAAAAGACAGCCAAGGAGTTAGATGCTATACTTGAAGGATGGCTACAAGAGCATCGCAAACAGAGAGTTAATGGTGAAGTTAAAGCAGAGGGTGAGCAGGATTTCATTGATGTAATGTTGTCACTTGAGGAGGAAGGTCACTTATCAAATTTCCTCTATGACTCGGATATAAGCATCAAATCAACATGCCTAGCTCTTATACTTGGTGGCAGTGATACCACAGCAGGGACGCTTACTTGGGCTATTTCTTTACTCCTCAACAATCGCCAAGCATTAAAAAAGGCACAAGAAGAATTGGACATGAATGTTGGCATGGACCGGCAAGTTGAGGAGTCAGATATTAAAAATCTTGTGTATCTTCAAGCTATTATCAAGGAAACCCTCCGACTATACCCAGCTGGACCCCTACTAGGACCAAGGGAAGCTCAAGAAGATTGTAATGTTGCTGGTTACCATGTCCCCGCTGGCACACGCTTGGTGGTTAACTTATGGAAGATTCATAGGGATCCCAAAATTTGGGAAGATCCTTCTGTTTTCAAACCTGAAAGATTTCTCACAAGCCATGAAGTTGATGTTAGAGGCCAAAACTTTGAACTCATTCCATTTGGTTCTGGTAGACGGTCTTGTCCTGGCATGTCATTTGCACTCTTAGTTCTTCACTTGACACTTGCTCGTCTACTTCATGCATTTGAATTTGCAACCCCATCACATGAACCGGTTGACATGACTGAAAGCCCTGGTTTAACTATTCCTAAGGCAACTCCATTAGAGGTTCTACTTACTCCCCGACTTCCAGCCCAATTATATGCCTAG 1584 0.4356 MNSSMQLTIITILASSLFLWHAFLRKRRSNKAGISKSKEAPVPAGAWPVIGHLHLLGGDNQLLYRTLGAMADQYGPAFNIWLGTRRAFVVSNWEVAKQCFTTNDKALASRPKTVAAKHMGYNYAVFGFAPYSPFWREMRKIATLELLSNRRLEMLKHVRVSELNMGITDLYNSWVQNGSKPVMMELNRWLEDLTLNMVVRMVAGKRYFGASATCDDDEARRCQKAINQFFHLIGIFVVSDALPFLRWFDLQGHERAMKKTAKELDAILEGWLQEHRKQRVNGEVKAEGEQDFIDVMLSLEEEGHLSNFLYDSDISIKSTCLALILGGSDTTAGTLTWAISLLLNNRQALKKAQEELDMNVGMDRQVEESDIKNLVYLQAIIKETLRLYPAGPLLGPREAQEDCNVAGYHVPAGTRLVVNLWKIHRDPKIWEDPSVFKPERFLTSHEVDVRGQNFELIPFGSGRRSCPGMSFALLVLHLTLARLLHAFEFATPSHEPVDMTESPGLTIPKATPLEVLLTPRLPAQLYA 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi537g00030 527 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi537g00030 527 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi537g00030 527 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi537g00030 527 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi537g00030 527 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi537g00030 527 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi537g00030 527 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi537g00030 527 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi537g00030 527 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi537g00030 527 Pfam Cytochrome P450 43 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi537g00030 527 SUPERFAMILY Cytochrome P450 43 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi537g00030 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Sebi537g00030 527 FunFam Cytochrome P450 82C4 30 518 - -
Sebi537g00030 527 Gene3D Cytochrome P450 25 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi537g00030 527 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi537g00030 527 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi537g00030 527 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi537g00030 527 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi537g00030 527 CDD CYP82 75 520 - -
Sebi537g00030 527 PANTHER CYTOCHROME P450 82C3-RELATED 20 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi537g00030 Sebi-Chr537 721327 723437 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi537g00030 40 527 Cytochrome P450 AT4G31940 70.040 0.0 735
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi537g00030 K23136 - gmx:100811993 936.791