Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi537g00021 ATGCAGGCCTCAGGCTGCTTCCTCGTGCTCTCTTTCCTCTTCCTATCATCATCTTTCTCCTTTGCACTTTCCTCTGATGAAGCCTCTTTCATTGCTCGTCGCCAATTGTTACACCTTAGTGAGAAAGATGATTTACCTGACCACTATGCAGATAACTATAAAACAGATCTAAAATTCCCTAATTCTAAGCTCAAGAGTGCTTACATTGCACTCCAGGCATGGAAAAAAGCAATTTATTCTGACCCAACAAACTTCACAGCGAATTGGGTAGGCCCAGATGTTTGTTCTTACAATGGAGTTTTCTGTGCCGAATCTCTGGATGACCCAAAGACCCAAGTTGTGGCTGGGATTGATCTTAACCATGCAGACATTGCAGGTTACCTTCCTCCAGAGTTTGGTTTGTTAACTGATCTTGCTCTTTTGCATATTAACTCAAACAGGTTCTGTGGGGTTCTCCCAAAGAGCTTCACCAAGTTAAAGCTTTTACATGAGCTTGATATCAGTAACAACCGTTTTGTTGGTCCATTTCCAAAGTCTGTTCTTTCAATCCCAGATATCAAATACCTTGACCTCAGGTTCAATGACTTTGAAGGGGCTATACCTTCTGAGCTTTTCAACAAAACACTTGATGCCATCTTTTTGAACAACAACAGATTCACATCCACAATTCCAGAGAACATGGGGTCTTCTCCAGCTTCTGTTGTGGTTTTAGCCAATAACCATCTCAGTGGATGCATTCCTGGAAGTGTTGGTGATATGAAAGGGACATTGAATGAGTTTATTTTGATTAACAACAACCTCACTGGTTGTTTACCCTCAGACATTGGAAAACTTGAACAAGTCTCTGTCTTCGATGTGAGCCAGAACTCATTTGTTGGTGTATTGCCAAGGACCTTCAAGGGGCTAAAAAATGTGGAGGAGATTTCAATTGCAAACAACAAGCTCACAGGTTTTGTGCCACGTGCCATATGTAGCTTGCCCAAATTGGTGAACTTCACATTCTCTTATAACTATTTCAATGGAGAGGAAGAAGGTTGTGTGCCTTCTAAAAAGGACAAGGACATTGTGTTGGATGATACAAACAATTGCATCCCAGATAGGCCAAAGCAAAAGGCAGCAAATGTTTGCAATGTTGTCATAAGCAAGCCTGTTGAATGTAGTAAGGCACAATGTGGAAACCCATCTAGCTCCAATTCTCCATCTGAGAAGCCAACACCAAAACCTTCCCCTTCTCCTTCTAAACCTCCAAGTGAGAAGCAAACACCATCCTCACCCTCTAAGCCTTCTCCATCTGAGAACCCAACACCAAAGTCACCCCCTCAACCTACCCCTTCACCCTCCAACCCTCCAACTCAGAAGCAAACACCACCACCAGCACAACCCAAACCTAGCCCTCCTCCTTCCAATCCTTCACCTGAAAAGCCAACAACACCAGAACCAGCACAGCCACCTAACGCAGAATCACCACCAGAGGAGGATGATCCTCACAAGGAAGCACCAAGGCGACGAACAAGGTCTCCACCTCCACCAGTTCAATCCCCACCACCACCAGTGTATTCTCCACCTCCACCGGTTCAATCCCCACCACCACCGGTTCAGTCCCCTCCTCCCCCAGTTCAATCCCCACCACCGCCGGTTCAATCTCCTCCTCCCCCAGTTCAATCCCCACCACCACCGGTTCAATCCCCTCCACCACCAGTCTACTCTCCACCACCTCCGGTTCACTCACCTCCTCCACCAGTTTACTCTCCACCACCACCGGTCCAATCTCCACCACCACCACCACCCCCTGTCTATTCTCCTCCTCCACCAGTCCACTCTCCACCACCACCAGTTAGCTCCCCTCCACCACCAGTCTACTCTCCTCCACCACCAGTTCAGTCCCCACCACCACCACCGCCAGTTAACTCTCCTCCACCACCAGTCCACTCACCACCACCACCACAAGTGCAGTCTCCACCACCACCTGCACAATCTGTTTCACCACCTCCTTCCCATGATGACGATATCGTTCTGCCCCCTCATTTTGGCTCTTCATATGCTTCCCCACCTCCACCAGTCATTGCCGGCTACTAA 2076 0.4778 MQASGCFLVLSFLFLSSSFSFALSSDEASFIARRQLLHLSEKDDLPDHYADNYKTDLKFPNSKLKSAYIALQAWKKAIYSDPTNFTANWVGPDVCSYNGVFCAESLDDPKTQVVAGIDLNHADIAGYLPPEFGLLTDLALLHINSNRFCGVLPKSFTKLKLLHELDISNNRFVGPFPKSVLSIPDIKYLDLRFNDFEGAIPSELFNKTLDAIFLNNNRFTSTIPENMGSSPASVVVLANNHLSGCIPGSVGDMKGTLNEFILINNNLTGCLPSDIGKLEQVSVFDVSQNSFVGVLPRTFKGLKNVEEISIANNKLTGFVPRAICSLPKLVNFTFSYNYFNGEEEGCVPSKKDKDIVLDDTNNCIPDRPKQKAANVCNVVISKPVECSKAQCGNPSSSNSPSEKPTPKPSPSPSKPPSEKQTPSSPSKPSPSENPTPKSPPQPTPSPSNPPTQKQTPPPAQPKPSPPPSNPSPEKPTTPEPAQPPNAESPPEEDDPHKEAPRRRTRSPPPPVQSPPPPVYSPPPPVQSPPPPVQSPPPPVQSPPPPVQSPPPPVQSPPPPVQSPPPPVYSPPPPVHSPPPPVYSPPPPVQSPPPPPPPVYSPPPPVHSPPPPVSSPPPPVYSPPPPVQSPPPPPPVNSPPPPVHSPPPPQVQSPPPPAQSVSPPPSHDDDIVLPPHFGSSYASPPPPVIAGY 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi537g00021 691 Gene3D Ribonuclease Inhibitor 235 366 IPR032675 -
Sebi537g00021 691 MobiDBLite consensus disorder prediction 505 662 - -
Sebi537g00021 691 Gene3D Ribonuclease Inhibitor 66 234 IPR032675 -
Sebi537g00021 691 MobiDBLite consensus disorder prediction 489 504 - -
Sebi537g00021 691 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 10 492 - -
Sebi537g00021 691 Pfam Leucine rich repeat N-terminal domain 68 102 IPR013210 -
Sebi537g00021 691 FunFam Leucine-rich repeat extensin-like protein 1 68 229 - -
Sebi537g00021 691 MobiDBLite consensus disorder prediction 401 488 - -
Sebi537g00021 691 MobiDBLite consensus disorder prediction 388 691 - -
Sebi537g00021 691 PRINTS Proline rich extensin signature 415 431 - -
Sebi537g00021 691 PRINTS Proline rich extensin signature 436 453 - -
Sebi537g00021 691 PRINTS Proline rich extensin signature 454 479 - -
Sebi537g00021 691 PRINTS Proline rich extensin signature 394 415 - -
Sebi537g00021 691 SUPERFAMILY L domain-like 68 346 - -
Sebi537g00021 691 Pfam Leucine rich repeat 281 337 IPR001611 GO:0005515
Sebi537g00021 691 Pfam Leucine rich repeat 138 196 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi537g00021 Sebi-Chr537 482209 484284 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi537g00021 5 596 Trihelix Transcription Factor Family AT3G19020 51.821 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi537g00021 - - gmx:100780677 605.905