Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi536g00024 ATGGCCACACTCTACAACTCCCCCACTTTCAGAATCGCCATCGACGCTCACCGTGATCCTCTCTTGCCCTTTCTCTGGTCTATCGAGAAAGCCCTAGATGATTCCAACAATTCCGGTTCGAATCTCAGTGAGTTACTCGGAGGTTGCATCAGGAAATTCAAGGACAGTGATCGGTACCGAAACGACGTCAGATTTCTCAAGATTTGGCTCCTCTATATGGGAGTTAGTGTGAATTTTGATAGTATTTTCAAAGAAATGCTGGATAGTAAAGTATGTGCCAACAATGCTTCACTTTATGTGTGGTCTGCATGCTTTTTTGAATCCAAGGGAAGATTGCGCGATGCCCTCACAGTCTATTATCTTGGCATTTGCAGGAATGCAGAGCCAATTGAGTGGTTGAAGAAGGCGCAGACCTTATTTCTCAGTAGAATTTCTGAAATATGGAATGCTGCTTCAAGCCAGAAGGTTGATTTTAAAGAATCTGCAAGGTTGGAAAATAATGGCATTAATCCATGGGACACCTCCACGATGGATGACTTGTTGAAGAAGATATATCCTTTAATTATGAAATTTGATGGGTATCATTCGAGCACTAAATCTTACACAGGAAAAGTTGCCTTGTCTGCTTTGAAGAATGCATCAAGGAAAAAAGTTATAGAGATAGGTGGAAAGAAGTACCATATCAAGGGCTGTGCTGGACAGGGTGGTTTTGCTCAAGTATATAAGGCATATGTCAACAGTGATCCTGATGATGTCGTCGCACTAAAGATACAAAAGCCAGCTTTCTCTTGGGAATTTTACATGTATCGTCAGCTTGATCAGCGCATTTCAGGCAGAGAAAGGTCAAGATATGGTTTCGCTCAAAGAATTCATCTCTATTCCGACTGTAGCATACTTGTCTGTGACTATGCAGCACATGGGACGCTACAGGATGTCATAAACTCTTATGTGGTCATAGGAAAATCCATGGAAGAAGTGTTATGCATTTATTACACAACAGAAATGTTACACATGGTTGAAACTTTGCATGATGTTGGCTTGATTCATGGTGATTTCAAGCCTGATAATCTGCTTATTCGCTATGCTAGGGGTGACCTTACCGAAGATGAGTTCTTGGACCGAAGTGGTTCTTGGTGTGATCAGGGGCTTTGCCTTGTTGACTGGGGACGAGGGATTGATCTGCATCTCTTTCCAGATCACACGGTATTTAAGGGAGATTGCAGAACTTCTGGTTTTCGCTGCATTGAGATGCAAGAGGATAAGCTGTGGAAATTTCAGGTAGACGCATATGGCATTTGCGCTGTTGTCCATATGATGTTGCATAATTCCTATATGGAAATCGTAAAAAAAGAATCATCTGATGGGGGCTACGAGTATCTTCCCAGACTACCCTTTAAACGTTACTGGAACGTTGAACTCTGGAAGACTTTCTTCACTAAGATGCTAAATAAATACCCTGGCGACGATGATAGAAGGTTGCTGGAGGATTTGAGGAAGTCCTTCCAGGGCTATATGGGCTCCAATCCCCAGCTTATAAAGAAACTAAAGGAGTTACTCGCGAGGCAAAGGGCTTCCTTGTGTTCTGCTTAG 1590 0.4258 MATLYNSPTFRIAIDAHRDPLLPFLWSIEKALDDSNNSGSNLSELLGGCIRKFKDSDRYRNDVRFLKIWLLYMGVSVNFDSIFKEMLDSKVCANNASLYVWSACFFESKGRLRDALTVYYLGICRNAEPIEWLKKAQTLFLSRISEIWNAASSQKVDFKESARLENNGINPWDTSTMDDLLKKIYPLIMKFDGYHSSTKSYTGKVALSALKNASRKKVIEIGGKKYHIKGCAGQGGFAQVYKAYVNSDPDDVVALKIQKPAFSWEFYMYRQLDQRISGRERSRYGFAQRIHLYSDCSILVCDYAAHGTLQDVINSYVVIGKSMEEVLCIYYTTEMLHMVETLHDVGLIHGDFKPDNLLIRYARGDLTEDEFLDRSGSWCDQGLCLVDWGRGIDLHLFPDHTVFKGDCRTSGFRCIEMQEDKLWKFQVDAYGICAVVHMMLHNSYMEIVKKESSDGGYEYLPRLPFKRYWNVELWKTFFTKMLNKYPGDDDRRLLEDLRKSFQGYMGSNPQLIKKLKELLARQRASLCSA 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi536g00024 529 ProSitePatterns Serine/Threonine protein kinases active-site signature. 347 359 IPR008271 GO:0004672|GO:0006468
Sebi536g00024 529 ProSiteProfiles Protein kinase domain profile. 226 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi536g00024 529 SUPERFAMILY Protein kinase-like (PK-like) 223 502 IPR011009 -
Sebi536g00024 529 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 161 523 IPR015661 GO:0007094
Sebi536g00024 529 ProSiteProfiles BUB1 N-terminal domain profile. 8 161 IPR013212 -
Sebi536g00024 529 Gene3D - 9 161 - -
Sebi536g00024 529 Gene3D Transferase(Phosphotransferase) domain 1 223 526 - -
Sebi536g00024 529 SMART mad3_bub1_i 11 123 IPR013212 -
Sebi536g00024 529 Pfam Protein kinase domain 226 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi536g00024 529 Pfam Mad3/BUB1 homology region 1 14 123 IPR013212 -
Sebi536g00024 529 SMART serkin_6 226 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi536g00024 529 FunFam Mitotic checkpoint serine/threonine-protein kinase BUB1 224 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi536g00024 Sebi-Chr536 499501 504202 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi536g00024 214 445 CBL-interacting serine-threonine protein kinases AT2G26980 24.255 1.49e-06 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK BUB Sebi536g00024 Pkinase 2.3e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi536g00024 K02178 - gmx:100802272 894.804