Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi535g00017 ATGAACAACAACATTCCAGGTTGGAATTTTGAGAGTGATACAAGTATCATCAATAAAAAGAAACCCATAGGGATGGACAGAGAACTTGTAGAGCTTCTATGGCAAAATGGGCAAGTAGTTATGCACAGCCAAACACATAGGAAACCAGTTGGGAATTCATCTGACTTGAGACAGGTTCTGAAAACTGATAGATCAACATTAAGGACTAGTGGGCCATATGGGAATTCAACACCCCAGAATGCTTCTTCAGCTTCTGCTAGTGCACAGTTTAAAGAGAAAGTTACTTCTAATCTGTCACAAAGTGAGGCCAGAGAGGGTTCAGTGATGACAGTTGGTTCAAGTCACTGTGGAAGCAATCAAATCCCTCAGGATCCAGATTTAAGCAGGGCATCAAGCAATGGTGTTTGGGCTAATACCTTATCAACTGAGCCTAAAGCTGTTAGAGATTGTGTCCAGAGAACAATTCCTCAGAGTGATAAAGGAAAATCAGAGATGATTGAACCAACTGTGACATCATCTTCTGGTGGCTCAGGCAGTAGTATTGGAAGAACTTGTTCTCTATCAACAAGAAGTCATGGCCAAAAGAGAAAAGCAACAGATGAAGAAGCATCAGAGGAACAAAACAAAGCATCAATGTTAGAAGAGGCAATAGAATACTTGAAATCACTTCAGTTACAGCTCCAGGTGATGTGGATGGGGGCTGGCATGACACCTCTTATGTTTCCAGGAATCCAGCAATATATGTCACAAATGAGTATGGGAATGGCTCCACCTTCAATTCACAATCCTATGCAATTACCAAGAGCCCCACATGATCAATCCATACCAAACCAGGCCTTAATGTGCCAAAATCCAGTTTTGGGTGCTTTTAATTACCAAAATCAGATGCAAAACCCTTGTCTTTCAGAGCAATATGCACGTTACATGGGTTATCAGCTTATGCAAAATGCCTCTCAGCCAATGAATGTTTTTAGATATGGTACCCAGCAAGGGCAAAATAGTCAAACAATGATTACAGCCAGCAATAACAGTGGACCCATGTGTGGAGCAGATAATATTGATGATGCTGTGAGAAGCAAAATGGGTTCTTCCACCTTTAACTGA 1104 0.413 MNNNIPGWNFESDTSIINKKKPIGMDRELVELLWQNGQVVMHSQTHRKPVGNSSDLRQVLKTDRSTLRTSGPYGNSTPQNASSASASAQFKEKVTSNLSQSEAREGSVMTVGSSHCGSNQIPQDPDLSRASSNGVWANTLSTEPKAVRDCVQRTIPQSDKGKSEMIEPTVTSSSGGSGSSIGRTCSLSTRSHGQKRKATDEEASEEQNKASMLEEAIEYLKSLQLQLQVMWMGAGMTPLMFPGIQQYMSQMSMGMAPPSIHNPMQLPRAPHDQSIPNQALMCQNPVLGAFNYQNQMQNPCLSEQYARYMGYQLMQNASQPMNVFRYGTQQGQNSQTMITASNNSGPMCGADNIDDAVRSKMGSSTFN 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi535g00017 367 MobiDBLite consensus disorder prediction 158 209 - -
Sebi535g00017 367 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 207 334 IPR031066 -
Sebi535g00017 367 MobiDBLite consensus disorder prediction 193 209 - -
Sebi535g00017 367 MobiDBLite consensus disorder prediction 158 192 - -
Sebi535g00017 367 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 204 252 IPR036638 GO:0046983
Sebi535g00017 367 Coils Coil 195 216 - -
Sebi535g00017 367 MobiDBLite consensus disorder prediction 64 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi535g00017 Sebi-Chr535 215951 218803 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi535g00017 1 344 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G59060 30.065 9.20e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi535g00017 K16189 - gmx:100811345 383.259