Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi535g00006 ATGTGTGTTGGAAAAGGAGAATTCACTGTGAATGTGACCAAGGAAGAGGTGGTGGCAGCAGTGCTGCCAATGCAAGACCACTGGCTGCCACTCTCTAACCTTGACTTACTTCTTCCCCCTGTGGATGTTGGAGTATTCTTTTGCTACAAAAACAACACATTAAGCTTTGGATCCATGGTGGGGACTCTGAAAAGTGCCTTAGCTGAGGCTCTTGTTTCCTATTATGCATTTGCTGGTGAAGTGGTGGCTAACTCCATGGGTGAACCAGAGCTACTTTGCAATAACCGTGGGGTGGATTTTGTAGAAGCAGTGGCTGATGTTGAGTTAGAGTCCCTTAATCTCTACAATCCAGATGACACCATTGAAGGGAAACTTGTCCCAACCAAGAAGCACGGTGTCCTTGCTGTTCAGGCAACTTGGCTGAAGTGTGGTGGATTAGTAGTGGCATGCACTTTTGACCATCGCATTGCTGATGCCTACTCTGCAAACATGTTCCTTGTATCATGGGCCGAGATAGCCCAACCCAACAAGCCCATGACCACAACGCAACCTTGCTTTCGACGCTCCCTTCTCATCCCACGACACCCCCTTTCCATTCATCCTTCACTCCATCACATGTATGCCCCCATCTCCTCCCTCCCTCCCCCACCTAAATTTGTATCCAAATCTGACCCAATCATTAGTCGCATATACTATGTCACAAGTGAGCAAATAAAAAACATGCAATCATTAGCAAACTCAAATGGTGCGAATCGGACAAAACTCGAGTCCTTCTCCGCATTCTTGTGGAAGATGGTTGCTGGAGCTGCTGCTGGAAGTGATGGTAAGAAAAAGGTTGTTGCTAAGATGGGTGTGGTGGTTGATGGAAGGAAGAGGCTTAATGATGGTGACAAGAACAAAGAAGAAATTATGAGTGTGTATTTTGGGAATGTGGTTTCCATTCCTTATGGTGGGAAAAAGGCAGAGGAGCTTGTGGAAAAGCCATTAAGTTGGGTGGCAGAGCAAGTTCATGAGTTCTTAGAAACAGCAGTGACAAAAGAGCATTTCTTAGGGTTGATTGATTGGGTGGAAGCACATCGACCAGTTCCTGGGTTAGCGAGGATTTATTGTGGTAGCACTGAGGAAGAAGGACCGGCTTTTGTGGTTTCTTCAGGACAAAGGTTTCCGGGGTCAAAGGTTGACTTTGGATGGGGGAAGCCAGTGTTTGCATCCTACCATTTTCCTTGGGGTGGAGATGCTGGTTATGTAATGCCAATGCCTAGTCCTAGAGGTAATGGTGATTGGGTGGTTTACATGCACCTTCCACAAGGCCACTTACACTTCATGGAATCTCAGGCACCCCAATTCTTTAGGCCCATCTCTTGGGATTATCTCTTAAATTAA 1383 0.4642 MCVGKGEFTVNVTKEEVVAAVLPMQDHWLPLSNLDLLLPPVDVGVFFCYKNNTLSFGSMVGTLKSALAEALVSYYAFAGEVVANSMGEPELLCNNRGVDFVEAVADVELESLNLYNPDDTIEGKLVPTKKHGVLAVQATWLKCGGLVVACTFDHRIADAYSANMFLVSWAEIAQPNKPMTTTQPCFRRSLLIPRHPLSIHPSLHHMYAPISSLPPPPKFVSKSDPIISRIYYVTSEQIKNMQSLANSNGANRTKLESFSAFLWKMVAGAAAGSDGKKKVVAKMGVVVDGRKRLNDGDKNKEEIMSVYFGNVVSIPYGGKKAEELVEKPLSWVAEQVHEFLETAVTKEHFLGLIDWVEAHRPVPGLARIYCGSTEEEGPAFVVSSGQRFPGSKVDFGWGKPVFASYHFPWGGDAGYVMPMPSPRGNGDWVVYMHLPQGHLHFMESQAPQFFRPISWDYLLN 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi535g00006 460 Gene3D - 212 445 IPR023213 -
Sebi535g00006 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 23 421 - -
Sebi535g00006 460 Pfam Transferase family 9 445 - -
Sebi535g00006 460 Gene3D - 5 209 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi535g00006 Sebi-Chr535 50326 52095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi535g00006 10 443 Monolignol Biosynthesis Gene Families AT5G48930 27.394 9.02e-39 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi535g00006 - - gmx:100809201 688.337