Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi533g00027 ATGTCTCACATAAAGGGAGAAACTGCAAGACTCAATGTCAGTGGGCACAAAGCGTGCTTCCCTTCCCCTTTGCGATTGCCTTATAGAGAGAGTTTGTCTATGGATAGTACTACACGATTGTCTGCTGGCAGCTTTGTTGTTTGGTTATCAGGGTATGATCTTCAGGAGAACATTACTTCTAGGGCACCAGAAGTGATATTGGGGCAAGGTCATGGGAGTGTTGTGGATTGGTGGACTTTTGGGGTGTTCTTGTATGAGATGTTATATGGGAGAACACCTTTCAAAGGTGAAAACAATGAAAAAACACTAGTGAACATCTTGAAGCAACCATTGACTTTCCCTAGAATTGCAGTGAGCAGTAGTAGTGAGTATGAAGAGATGGTGAAAGTTCAAGACCTTATAAGCAAGTTGTTGGTGAAGAATCCAAATAAGAGAATTGGAAGCTGCATGGGTTCTGCTGAGATCAAAAGGCATGAGTTCTTCAAGGGT 489 0.4254 MSHIKGETARLNVSGHKACFPSPLRLPYRESLSMDSTTRLSAGSFVVWLSGYDLQENITSRAPEVILGQGHGSVVDWWTFGVFLYEMLYGRTPFKGENNEKTLVNILKQPLTFPRIAVSSSSEYEEMVKVQDLISKLLVKNPNKRIGSCMGSAEIKRHEFFKG 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi533g00027 163 Pfam Protein kinase domain 61 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi533g00027 163 SMART serkin_6 3 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi533g00027 163 SUPERFAMILY Protein kinase-like (PK-like) 61 162 IPR011009 -
Sebi533g00027 163 Gene3D Transferase(Phosphotransferase) domain 1 61 163 - -
Sebi533g00027 163 PANTHER FLIPPASE KINASE 1-RELATED 62 163 - -
Sebi533g00027 163 ProSiteProfiles Protein kinase domain profile. 1 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi533g00027 Sebi-Chr533 737928 739195 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi533g00027 62 163 AGC Kinase Gene Family AT2G26700 76.471 3.14e-53 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Sebi533g00027 Pkinase 8.3e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi533g00027 K08286 - gmx:100777988 201.06