Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi533g00004 ATGGGTGATGAAGAGTTCGCCGGAGAATCCAAAACGGCGGTGGCACCACCCACCGGAGCTTCCCTCCTCCGGCGAGCACTGGAGCTCATCTGCTCCTTGCTCTCTCTCTCACACTCGATCAGGGTCTTCGCCGGAAAATGGCAACTCATTCGGAACAAGCTTGAGGAGCTTCACTCCGGTCTAATCGCCGCCGAGAACTGCGATTCCGGCGAGAACCCTTCTCTTTCCCGGTTGGTCCCTTCCATTTTAGCCACCGTTAAGGAGTGTCACGATCTGGGTCAGCGCTGCGTCGATTTCTCCTACAGTGGGAAGCTTCTGATGCAGAGTGATTTGGACATGGCGTTTGCGAAGCTCGATGGTCTCGTGAAGAAGCTCTCAGAGATATACAAAACGGGTATTTTGACAAATGGGTATGCGTTGGTTGTGTCAAAACCGAGTCTTGGTGCTTCTAAAGAGGACATGAGGTTCTATGTGAGAGACCTTTTGACAAGAATGAAGATTGGTGATTTGGGTATGAAGAAACAGGCCTTGAGGAACCTTCTAGAGGTTGTGGTGGAGGATGAGAAGTATGTGAAGGTGATTGTGGATGTTGGTGATGTTGTTCATTTGTTGGTGAGTTTTCTTGGTTCAGCTGAGGTGGAAATCCAAGAGGAAAGTGCTAAGGTTGTTTCTGTTGTTGCGGGTTTTGATTCCTATAAAGGGGTTTTGGTTGGTGCTGGGGTTATTGCACCTTTGGTTCGGGTTTTGGATTGTGGTAGTGAGTTAGGGAAGGTTGCAGCTGCAAGGTGTTTGATGAAATTAACTGAGAATTCTGATAATGCTTGGAATCTTGTTGGTGTTGAGGAGATAAAGAGGTTTATGGTTGAGGAAGGTGCTGTGTCCACGTTTATTGGGCTTGTGAAATCAAAGGAGGAAACTATTCAGGTGAATTCCATTGGGTTCATTCAGAATATTGCCTCTGGTGATGAGATTGTTAGGCAGATGGTGATAAGAGAAGGTGGAATCCGTGCTTTGTTGCGAGTTTTGGATCCTAAATGGTCCTATTCTTCTAAAACCAGGGAGATAGCAATGAGGGCTATTGAGAATTTGTGTTTTTCTTCATCAAGTTCTATAAATATTCTGATGAGTTATGGCTTTGTGGATCAGCTTCTATATTATGTTCGAAATGGGGAGGTTTCAATTCAAGAGTTGGCTTTGAAAGTAGCATTTAGATTGTGTGGAACATCAGAGGAGGCTAAGAAAGCAATGGGTGATGCAGGTTTTATGTCAGAGCTTGTTAAGTTTCTCAATGCAAAATCATTTGAGGTTAGAGAAATGGCAGCTGAAGCACTCTCTAGCATGGTTATGGTACCTAGAAATAGAAAGAGATTTGTGCAAGATGATCATAACATAGCCCTTCTTCTACAATTGCTTGACCCAGAGGAGGGAAATTCAGGTAACAAAAAGTTCTTAATCTCTATCTTAATGTCATTGACAAGTTGCAACAGTGGAAGGAAAAAAATTGTTAGTTCTGGATATGCCAAAAACATTGAGAAACTTGCAGAAGCTGAAGTTTCTTCTGATGCCAAAAGACTTGTCAGGAAGCTATCCACAAACAGATTCCGCAGTATGTTGAATGGAATCTGGCACTCATGA 1635 0.4391 MGDEEFAGESKTAVAPPTGASLLRRALELICSLLSLSHSIRVFAGKWQLIRNKLEELHSGLIAAENCDSGENPSLSRLVPSILATVKECHDLGQRCVDFSYSGKLLMQSDLDMAFAKLDGLVKKLSEIYKTGILTNGYALVVSKPSLGASKEDMRFYVRDLLTRMKIGDLGMKKQALRNLLEVVVEDEKYVKVIVDVGDVVHLLVSFLGSAEVEIQEESAKVVSVVAGFDSYKGVLVGAGVIAPLVRVLDCGSELGKVAAARCLMKLTENSDNAWNLVGVEEIKRFMVEEGAVSTFIGLVKSKEETIQVNSIGFIQNIASGDEIVRQMVIREGGIRALLRVLDPKWSYSSKTREIAMRAIENLCFSSSSSINILMSYGFVDQLLYYVRNGEVSIQELALKVAFRLCGTSEEAKKAMGDAGFMSELVKFLNAKSFEVREMAAEALSSMVMVPRNRKRFVQDDHNIALLLQLLDPEEGNSGNKKFLISILMSLTSCNSGRKKIVSSGYAKNIEKLAEAEVSSDAKRLVRKLSTNRFRSMLNGIWHS 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi533g00004 544 SMART arm_5 409 449 IPR000225 GO:0005515
Sebi533g00004 544 SMART arm_5 229 269 IPR000225 GO:0005515
Sebi533g00004 544 SMART arm_5 322 365 IPR000225 GO:0005515
Sebi533g00004 544 SMART arm_5 187 228 IPR000225 GO:0005515
Sebi533g00004 544 SMART arm_5 279 320 IPR000225 GO:0005515
Sebi533g00004 544 Gene3D - 157 533 IPR011989 -
Sebi533g00004 544 SUPERFAMILY ARM repeat 159 520 IPR016024 -
Sebi533g00004 544 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 276 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi533g00004 Sebi-Chr533 150261 151995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi533g00004 141 344 U-box Gene Family AT2G23140 24.757 7.49e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi533g00004 - - gmx:100809382 832.017