Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi533g00001 ATGCTTAATAAAGTGGATGTCAAGTTGACTAAAGGTAGGAATTTTGATAGTATTGACATTGCTCACAAGCTACCACCTAAGCCAGTGGACGAGATGCCTTATGTTGAGACTGTAGGCTTGGATTCGATGCTGGATAAAGTCTGGAATAGTATTCAAGATGAAAATGTGAGCATCATCGGTTTATATGGAATGGCTGGAGCTGGAAAAACTACCCTCCTAAAAAGAATTCATAGTGAATTTGGAAAGAGTACGCATGACTTTGATCTAGTGTTATGGGTGGTGGTTTCAAGGGATTTTAATATCAATAACATTATGAATGATATCCGAAATAGGATAGGGATAGATGATAATATTTGGAACAAAAGTAGCAGCCAAGACCAAAGAGTGGCAAAGATCTATCAAGTCTTGAAGCAAAAGAAATTTGTGCTGATGTTGGATGACCTTTGGGGAAAGTTAGAACTAGAAAAGGTGGGAGTTCCAATTTCAAAAGATAAATCCAAAGTATTATTCACAACAAGGTCTGAGGATGTGTGTGCAAAAATGCAAGCTCAAAAGAAATTCAAAGTGGAATGTTTGAAAGAGCAAGAAGCATTTGATTTGTTTTGCCTGAAAGTAGGTGAAGAGACCTTAAAGTGTCATGGAGAAATTCCAAGGCTAGCATGGGATATGGCTAAAGAATGTGCAGGGTTACCACTAGCACTTGTTACAGTGGGAAGTGCCATGGCTGGAGTTAAAAGCATTGAAGCATGGAGGCAAGCCAAAGGTGATTTAAGGGGTTCTCCTTGGACAGCTTCAAATTTTGAGGAACAAGTCTTTCATATCCTGAAGTTTAGCTATGATAGATTGCCAGATGTAACCCACAAAAACTGCTTCCTGTATTGTGCACTATACCCAGAAGATTATAAAATCATTGTTGACAATCTTATTGATCGATGGGTTGGAGAGGGATTTCTTAGTAAAAAGAGTATATATGACATGTATGAGCAAGGGAAATCAATCATTGAAAAATTAAAGCTTTCATGTCTATTAGAGGGTGTTGAGGATTCTGATGGTGAGTGGAGGTCTGCGATTAAGATGCATGATGTGATTCGAGAAATGGCACTATGGTTAGCCCGTGATCAAGATAGAAGCAAAGAGAAAATTGTAATTCAAGGGGAAGCATTATCAATGTCAGAAATGGATTCTGAAAGATTGAATGTTGTGGAGAGGATTTCAATGATAAGTTGTAGAGGATTTTGGCAAGTACCAGCTTGTCCAAATCTCATCACCCTATGTGTGTTGGCTAAGGTGGTCATTATTGACTATTCAAATATCCAATCCATGACAAGATTGAAAGTCTTGGATCTATCAAATACTTCAATTAAATGTCTCCCAAAAGAAATAGGCCAATTATTCAACTTGGAATACCTTAACCTATCAAGAACAGAAATAGAAGAATGGTTGCCGATTGAATTGAAACATTTGAGGGTTTTAATTATGGAATATTGCAGATTCAATCTTGGATTAATTCCTTTGGAAGTAATAGAAAGCCTTGAGCAATTAAAAGTGTTCAGATTTTGTGCAGATATCAAAAGGATCATTTTTGACTACTTTGAGGGGGAGGAAACATTCCTAGAGAAGTTGGAGTCCTTACCGAAATTGGAGGAATTGTTCATCAAATTAACTACCATAAGTGGCATTCATAAATTACTTCAGTCTGCCAAATTGCGAGCTTGCTCAAGACAAGTGTGGTTTAATGACATTTTTAACCCCCTTGAAATGTCCTCATTACTAGAATCTTTATCGAGAATGAAGCATATGGAACATTTAAATCTATCACGTTTACCTCGTATTAAGGAAGGATCATCCATTACCAACACATGCCATCTTAACAAGCTTCGCTCAGTGAACATCAGTGTTTGTGGTTCAATAACTCATTTGACATGGCTGAGGTATGCTTCACTTCTTGAGTTTCTTGAGGTTTCCCATTGTATTTCAATTGAAGAAGTTGTGAAGGAAGCAGAGTATGAAGATGGTGGCTCGGACAAAGACAACACCAATGGTATTTTCCCAAATCTTAAACAACTCCGCCTTCAACATTTGCCAAATTTGGAAAGCATCTACAATGGAGCACTGGCTTTACCTTTGTTGAAATATATTTATGTTCAAAGTTGCCCAAATCTAAGGAAGCTTCCTATAAATTCTAGCTCTGCTTGCAAGGACAGCTTGATTGCAATCAGAGGAGAGGGGAGGTGGTTGAACAATTTAGAATGGGAAGAGACAGACACGACCATTAAAGATCTAGTACACTCAAAATTTCGATATATCTATACTTATACAAGCGTACAAAATCATGGCACAATGGTATTCCATGCAACGCTTATTGACATTTAG 2373 0.3755 MLNKVDVKLTKGRNFDSIDIAHKLPPKPVDEMPYVETVGLDSMLDKVWNSIQDENVSIIGLYGMAGAGKTTLLKRIHSEFGKSTHDFDLVLWVVVSRDFNINNIMNDIRNRIGIDDNIWNKSSSQDQRVAKIYQVLKQKKFVLMLDDLWGKLELEKVGVPISKDKSKVLFTTRSEDVCAKMQAQKKFKVECLKEQEAFDLFCLKVGEETLKCHGEIPRLAWDMAKECAGLPLALVTVGSAMAGVKSIEAWRQAKGDLRGSPWTASNFEEQVFHILKFSYDRLPDVTHKNCFLYCALYPEDYKIIVDNLIDRWVGEGFLSKKSIYDMYEQGKSIIEKLKLSCLLEGVEDSDGEWRSAIKMHDVIREMALWLARDQDRSKEKIVIQGEALSMSEMDSERLNVVERISMISCRGFWQVPACPNLITLCVLAKVVIIDYSNIQSMTRLKVLDLSNTSIKCLPKEIGQLFNLEYLNLSRTEIEEWLPIELKHLRVLIMEYCRFNLGLIPLEVIESLEQLKVFRFCADIKRIIFDYFEGEETFLEKLESLPKLEELFIKLTTISGIHKLLQSAKLRACSRQVWFNDIFNPLEMSSLLESLSRMKHMEHLNLSRLPRIKEGSSITNTCHLNKLRSVNISVCGSITHLTWLRYASLLEFLEVSHCISIEEVVKEAEYEDGGSDKDNTNGIFPNLKQLRLQHLPNLESIYNGALALPLLKYIYVQSCPNLRKLPINSSSACKDSLIAIRGEGRWLNNLEWEETDTTIKDLVHSKFRYIYTYTSVQNHGTMVFHATLIDI 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi533g00001 790 Gene3D - 192 278 IPR042197 -
Sebi533g00001 790 Gene3D - 18 191 IPR027417 -
Sebi533g00001 790 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 20 725 - -
Sebi533g00001 790 Gene3D - 279 368 IPR036388 -
Sebi533g00001 790 SUPERFAMILY L domain-like 347 731 - -
Sebi533g00001 790 Gene3D Ribonuclease Inhibitor 540 739 IPR032675 -
Sebi533g00001 790 FunFam Probable disease resistance protein At5g66910 191 278 - -
Sebi533g00001 790 Pfam NB-ARC domain 41 280 IPR002182 GO:0043531
Sebi533g00001 790 Gene3D Ribonuclease Inhibitor 374 527 IPR032675 -
Sebi533g00001 790 FunFam Probable disease resistance protein At1g61300 21 186 - -
Sebi533g00001 790 PRINTS Disease resistance protein signature 439 455 - -
Sebi533g00001 790 PRINTS Disease resistance protein signature 58 73 - -
Sebi533g00001 790 PRINTS Disease resistance protein signature 135 149 - -
Sebi533g00001 790 PRINTS Disease resistance protein signature 227 241 - -
Sebi533g00001 790 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 294 IPR027417 -
Sebi533g00001 790 FunFam Probable disease resistance protein At1g63360 279 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi533g00001 Sebi-Chr533 45805 48177 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi533g00001 35 380 WRKY Transcription Factor Family AT5G45050 21.813 1.94e-07 53.1