Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi532g00005 ATGGAAGTCAGTCCCTCCTGCAATGCCGGCACACCGCCGCGCCGCAGTGTCCGCCGGAGGTTGGTCCAATCGACGCTCTTCCCTCTCAAGCCACCAGAACCCCTCGACAAACCCGAGGAAAACGACGATAGAGAGGATGAACAAGATGAGGATTTCTGCGACACCGCCAATCGCAAGAAGAGGAAGCCAAAGAGAAAATCCACTCCTCGAAAAAAAGCCTCCAAGAATGCCACGCCAAAGAAAAATGCATCAGCTAATGGGATCAAGGGGTCAGTTTCGCGGCACGTGCTGGCTGATTCCGATCAGATTGATACGCCCGTGCCTGATTTACGGTTAGAGGCAAAGTTGTCAGCTGAGGAAAATTCAAGGATGTTTGCAGGACGGCAAATGCATCCTTTTTTTTCGTCATGGAAGGCTGGAAAGAAAGTTCAAGACCTGTCTGACTCAGGAAGTAATTTATGCAAAGCTAAGAGTGAGGGTGAAAGTATTACATGTGGCCCTATTCATGTATTTGAAAATATTAAGGATGATACCTCATCCCTTGACTGGAGAAACTGGACGTTTTTGGGAAATACCACCTATGTGAATTATGGTTCAGAAAGTTCAAATCCATCTGTTTTGGAGGGTTCTGTTGAATCCTTAAATTTTGAAACGCTTCTTAGTACTTTGGATTCATCAGGTGCTTCAAAATTTCAGAATACCTTATCTTCTTCAGATAGACTTTCTATACATCCAGAAAATCTGCTAGAAACGTTGCCATCAAGTGCAGCTTCACCTGTGGAACAAACTGTATGTCCTCAGATGCCAAAAGATGCTAAAGTGGACTTGGATGTGGATGAATCTGTTGCTTTATTGCAAGCTGGGATTTTTAGAAAGTCAGATTCTGAGCCATTGAGTAGATTTCTTCAAGAAAGTATGAGGTCATACTACCATAATTGTGAAGCCAAGGCTGAAGGCAGTTTATGGACATACAAATACAAGCCAACAAAGGCTGTTGAGGTATGTGGTAATGATGAAGCTGTGAATTTCTTGCGTGACTGGCTACATCTTTGGCATGAAAGACGTTATCAAAGCAGGAAAGATGCATCTAATAGGGATAAAAGTAATATGCAAGATGGTGATGATGATTATAATTTTTCTCATAGTGACTACGATTCAGAAGATATGGACGGGGAGGATTCGCTGCAGAATGTTCTTTTAATTACAGGACCAATTGGGAGTGGCAAGTCTGCAGCAGTCTATGCTTGTGCCCAAGAGCAAGGGTTTGACATATTAGAGCTCAATGCATCAGATTGTAGAAATGGGACTGTGGTCAAGCAATATTTTGGAGATACTCTTGGTTCACTTGGATTCAAAAGGTTATCAGAACACACTGCGAGTTCACAGAAGAAAAATACGAAATTGCCACCAGCTCTGGCTTCATTTAATGTTAAAGCTGCTGATGAGGTGAATGATGGGGTGGTTGAACTAATAACCATATCTGATGATGAAGCTCATAGCCCTGGTGGAACATCACAGAAGTTACTTGGCAAAAATAATGTCATTGCATGTGATAAAGTCCAAACTTTGATTCTAGTTGAGGATGTGGACATCCTTTTCCCTGAAGATCGTGGATGTATTGCTGCCATACAACAGATTGCTGAGACAGCTAGGGGGCCGATTATATTGACCAGCAATTGTGATAATCCTGGCCTGCCAGATAATTTTGATAAGCTCCACATTTCATTCTCAATGCCAACACCAAAGGAGTTGCTTTGCCATTTGTACACTGTTTGTCTCACAGAAGGAGTCAACATCCATCCTCTTTTACTGGGGAAGTTTATACAGTCTTGTGATGGAGATATTAGAAAAACCATTCTGCATCTTCAGTTCTGGTTGCAGAGTAAAAGATTTAGAAAAGATGGAAAAGCACAAGCTGGTTATGGGTCACTTCCTTTTAATCTTATTGTTGGCCATCAGATATTACCGAAGATGATGCCCTGGGATTTTCCCTCAGAGATATCTGAAATGATCGAGAATGAATTTGCTAAATCTGTAAATATAATGGAAGAGAACTCTAGTTTGCAAGAGTTAGATGAGCAGTATATGGAGACTGATTATATAAAGGCAAAGAAGGAGGAGATGATTGAGAGAAATGGATCTATAACAGATTACAGTGAGCTTGAAATTCAATATAATGCTATTTCTGAGTTTTCCAATTCTTCCAGATCCCCACATGCATCCTCTCGGCAAAATGGTCGAAGGAAACTTGTAGTGATGTCCTCTGATTCTGAGGATGAGGATTCAAATAATAGACATCCTCTAGACACACATGATGAAGCTAGTAAGGGACAATCCATCAAAGAAAATAAAGAAAGTTCCTCTCAGTTTCAATTGCAGGAAAACTACCCCAGCACATCAGTTCGCAAACTGGTTTGTTCTCAATTGGAGGATTCAGAGGAGGAACATTTTAAATATTCAGAAACAGCCGAGGATACATGCTTGAATGAAACATGTAAATCAGTTGATATATCCTGTGTGCCAGAATCAACGTTAGTTCCTGAGACTGTGATGGAAGGTGGAACAGAGACAATGTCTGGAGCTGTGTCCTCTGGCCATCTTGTTGGTCCTGTAGAAGTTTCTATAAACAATGAGTTGAAACCATTCACTTTCAGTGGTCGCAAACGCTTAGCAAAATTGTCACAAAATTCAGATTTGTTTGTGGATGGTGAAATTCCAGATTCTTCTCCGAAAGAGGCTGTGCAAGATTTTCTACATGAAAATATGGAAACTACAATTGTCAAGGTGATGGATGAGTGCAGTCGTGTGGATTTCAAACTAAAGTCAACATTTGTTGAGTCCAGTCCATCAATGGAGACAGATATGGTGCAACAGCTGTGGAGAAAACTCCGAGAGCGTCAAATGGATTTAAGACAGCATGTCAACTCAGAACAGCCAGGCGCGTTTCAAGTTGTTAAACTTGCTAGTAGGCTGAGCGGTCTAATTTCAGAAGCTGATTTGTTTCATAATCACCGACAGAAAAGTGATATTATGGAACCCCCAATGTTCCTTTCTGGTGAAGCCACATCTAGTTGGTATCATGAGCAAATAATGATGCCCACTATTGCTGTACATGGATTTTGTTTTTATGCAAAACTTATAGCAGATGTTGGATCAAAGTTTGGTTGTGCCGACATGGTTGATTTAACTTCTGAGATGTTGGCTTCCACAACTGATATTATGGCATTGGGGAAATTATCTAGACAGGATCTCGCTAAAAGTATGATTATTTATACTGGAAAGGAATTAGAGTTGAACCACGCAATAAATGATATGCGGAAGAGTGAAAACAAAACATCTCTGTTCGAGGTCATCCAATCCATTGTTCCTGCCAGAATATCCTTGGCACTGAAAGGTGATGCATTCAATGAATATCTATGTTCATTGCGCCAAATTTCTAGGTCAGAAGCTTCCCGTATTGCACAATGTGTCGAAAAGAAGAGAAGAGGAAGGGTGAGGGGTGCTCAACATTACTTGAGCAGATGCACAATGTTGTCCTCTGAAGACATATCTTTGGTGAATGAAGGTGATTTGTACAGAAAGACTTCTTCACAATATACAACTAACATGGAAAGCTGA 3618 0.4102 MEVSPSCNAGTPPRRSVRRRLVQSTLFPLKPPEPLDKPEENDDREDEQDEDFCDTANRKKRKPKRKSTPRKKASKNATPKKNASANGIKGSVSRHVLADSDQIDTPVPDLRLEAKLSAEENSRMFAGRQMHPFFSSWKAGKKVQDLSDSGSNLCKAKSEGESITCGPIHVFENIKDDTSSLDWRNWTFLGNTTYVNYGSESSNPSVLEGSVESLNFETLLSTLDSSGASKFQNTLSSSDRLSIHPENLLETLPSSAASPVEQTVCPQMPKDAKVDLDVDESVALLQAGIFRKSDSEPLSRFLQESMRSYYHNCEAKAEGSLWTYKYKPTKAVEVCGNDEAVNFLRDWLHLWHERRYQSRKDASNRDKSNMQDGDDDYNFSHSDYDSEDMDGEDSLQNVLLITGPIGSGKSAAVYACAQEQGFDILELNASDCRNGTVVKQYFGDTLGSLGFKRLSEHTASSQKKNTKLPPALASFNVKAADEVNDGVVELITISDDEAHSPGGTSQKLLGKNNVIACDKVQTLILVEDVDILFPEDRGCIAAIQQIAETARGPIILTSNCDNPGLPDNFDKLHISFSMPTPKELLCHLYTVCLTEGVNIHPLLLGKFIQSCDGDIRKTILHLQFWLQSKRFRKDGKAQAGYGSLPFNLIVGHQILPKMMPWDFPSEISEMIENEFAKSVNIMEENSSLQELDEQYMETDYIKAKKEEMIERNGSITDYSELEIQYNAISEFSNSSRSPHASSRQNGRRKLVVMSSDSEDEDSNNRHPLDTHDEASKGQSIKENKESSSQFQLQENYPSTSVRKLVCSQLEDSEEEHFKYSETAEDTCLNETCKSVDISCVPESTLVPETVMEGGTETMSGAVSSGHLVGPVEVSINNELKPFTFSGRKRLAKLSQNSDLFVDGEIPDSSPKEAVQDFLHENMETTIVKVMDECSRVDFKLKSTFVESSPSMETDMVQQLWRKLRERQMDLRQHVNSEQPGAFQVVKLASRLSGLISEADLFHNHRQKSDIMEPPMFLSGEATSSWYHEQIMMPTIAVHGFCFYAKLIADVGSKFGCADMVDLTSEMLASTTDIMALGKLSRQDLAKSMIIYTGKELELNHAINDMRKSENKTSLFEVIQSIVPARISLALKGDAFNEYLCSLRQISRSEASRIAQCVEKKRRGRVRGAQHYLSRCTMLSSEDISLVNEGDLYRKTSSQYTTNMES 1205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi532g00005 1205 MobiDBLite consensus disorder prediction 752 780 - -
Sebi532g00005 1205 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 8 1197 IPR004582 GO:0006281
Sebi532g00005 1205 MobiDBLite consensus disorder prediction 781 795 - -
Sebi532g00005 1205 Gene3D - 579 640 - -
Sebi532g00005 1205 MobiDBLite consensus disorder prediction 1 102 - -
Sebi532g00005 1205 MobiDBLite consensus disorder prediction 359 390 - -
Sebi532g00005 1205 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 581 642 - -
Sebi532g00005 1205 MobiDBLite consensus disorder prediction 359 385 - -
Sebi532g00005 1205 MobiDBLite consensus disorder prediction 59 77 - -
Sebi532g00005 1205 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 321 627 IPR027417 -
Sebi532g00005 1205 Gene3D - 319 571 IPR027417 -
Sebi532g00005 1205 MobiDBLite consensus disorder prediction 732 795 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi532g00005 Sebi-Chr532 60073 70607 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi532g00005 322 624 Core DNA Replication Machinery Family AT5G22010 21.725 8.19e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi532g00005 K26118 - gmx:100784209 1651.72