LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi532g00003	ATGCAGAGCACTCTGTTTCTCCTTTTGCTTCTTCAAGCTTTGATCACTGCGAGCTGTAAATCCACCATTGAGCCATGCACAAACTCAGACTCTTGCAATGCACTGTTAGGTTACACGCTTTACACGGACCTTAAGGTCTCTGAGGTAGCTTCCCTCTTCCAAATCGACCCTATCGCTCTTCTCACCGCCAATGCCATTGATATTTCCTACCCTGACGTGGAACACCACATCCTTCCTTCGAAGCTTTACCTCAAAATCCCCATCTCATGTTCCTGCGTTGATGGGATTCGTAAATCGGTGTCTACCAATTACAAGACGCGTCCTTCAGATACTCTTTCTTCCATTGCTGACTCAATCTATGGGGGTTTGGTCTCTGCTGATCAACTCAGAGAGGCCAATTCCATAACTGACCCTTCAGTGCTTGATGTAGGGCAGAACCTTGTGGTGCCTCTTCCTTGCACTTGCTTCAATGGTTCTGATAACTCTTTGCCAGCAATTTACCTCTCCTATGTGGTTCAGCCGCTTGATAGTTTGGCTTCAATTGCTGCTAGGTATTTCACTACTCTTACTGATTTGATGAATGTTAATGCCATGGGGAGCACAGCTATCTCTGATGGTGATATCCTTGCTATTCCAATACCAGCTTGTGCTTCAAATTTTCCAAAATATGCTTCTGATTTTGGCTTGCTTGTCCCTAATGGAAGTTATGCCATTACAGCAGGCCACTGTGTACAGTGTAGCTGTGGACCACGAAACCTAAATTTGTACTGTATGCCAGCTTCTCTAGCTGTTTCTTGTTCTAGCATGCAATGTAAAAACAGCAATCTCATGCTAGGGAATGTTACAGTGCAACAGAGTAGTGCTGGTTGCAATGTTACTTCTTGCAGTTATGATGGTATTGTTAATGGCACCATAGCAACAATGTTGTCCGCATCCCTTCAGCCTAGATGTCCAGGGCCACAGGAATTCCCTCCTCTTATTGCCCCACCTACATCTGTTCAGAGGGAATCGGTATTTGGACCAGCACCGGCACCATCACCGCAGTCAGATGGAACTGGTCTGACATCACCCAAATCCTCACTGGTGCCTGCAACAGGGCTTCCGGGATTCTCTCCTGCAAATGGCCCTGTTAGTGGGATTTCTTCTGGTGCTTCTGCTGCATGCTCCTTGGTGAAACCATCACCCACTTTGACATCTGCTCTTGTGTTATTACTTGTCAAGTTGACGATCCCTGTGGCACTGTAA	1245	0.4635	MQSTLFLLLLLQALITASCKSTIEPCTNSDSCNALLGYTLYTDLKVSEVASLFQIDPIALLTANAIDISYPDVEHHILPSKLYLKIPISCSCVDGIRKSVSTNYKTRPSDTLSSIADSIYGGLVSADQLREANSITDPSVLDVGQNLVVPLPCTCFNGSDNSLPAIYLSYVVQPLDSLASIAARYFTTLTDLMNVNAMGSTAISDGDILAIPIPACASNFPKYASDFGLLVPNGSYAITAGHCVQCSCGPRNLNLYCMPASLAVSCSSMQCKNSNLMLGNVTVQQSSAGCNVTSCSYDGIVNGTIATMLSASLQPRCPGPQEFPPLIAPPTSVQRESVFGPAPAPSPQSDGTGLTSPKSSLVPATGLPGFSPANGPVSGISSGASAACSLVKPSPTLTSALVLLLVKLTIPVAL	414

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi532g00003	414	PANTHER	LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2	4	321	-	-
	Sebi532g00003	414	Gene3D	LysM domain	157	220	IPR036779	-
	Sebi532g00003	414	SUPERFAMILY	LysM domain	168	213	IPR036779	-
	Sebi532g00003	414	SUPERFAMILY	LysM domain	103	151	IPR036779	-
	Sebi532g00003	414	MobiDBLite	consensus disorder prediction	348	362	-	-
	Sebi532g00003	414	CDD	LysM	169	211	IPR018392	-
	Sebi532g00003	414	SMART	LysM_2	103	150	IPR018392	-
	Sebi532g00003	414	SMART	LysM_2	169	212	IPR018392	-
	Sebi532g00003	414	MobiDBLite	consensus disorder prediction	333	367	-	-
	Sebi532g00003	414	Pfam	LysM domain	104	150	IPR018392	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi532g00003	Sebi-Chr532	35243	37695	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sebi532g00003	5	389	LysM Receptor-like Protein (LYPs) Gene Family	AT1G21880	70.103	0.0	561

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi532g00003	-		-	gmx:100777292	675.626

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