Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi531g00034 ATGGCAATTCAAGATCAAAATGGATTTACTAGACCAAGGGTTGGTCCTCCAGTAGGAAATGGAGTATCTTTGAGTTCTGGACAACATTCTGTTGCACATATTCAACTTAATGATCAGTTTTCTTGCGGAAATGACTATGCTCTGAAGGTAAGGAAACCATATACTATCACAAAACAGAGAGAGAGATGGACAGATGAAGAGCATAAGAAGTTCCTTGAAGCTTTAAAGCTGCATGGCCGGGCCTGGCGACGCATTGAAGAACATGTTGGCACAAAGACTGCTGTTCAGATTCGAAGTCATGCTCAGAAGTTTTTTTCTAAGGTTCTTCGTGACTCTAGTGGGAAAATTACAAACACTGAGGAATCAATTGAAATTCCTCCTCCAAGACCAAAACGAAAACCGATGCATCCTTACCCTCGTAAGCTAGCTGAGACCCCTAATAAAGAAATTTCGATCCCAGAAGAGCTGATGAAGTCTAATTCTCTGAAGTCATCAGATTTTGATCAAGACAACCAATCTCCCAAATCAGTGTTATCTGCAGTTGGTTCAGACAGCCTTGGTTCCTCTGATTCAGATACACCAAATGGAAGTCTATCCCCAATGTCATCCATTAGTGGTGTCCATACAAGTGGTTTTACACTTGCTGAACCCAAAACACCATCTGAGGAAGCTGCATTAAATTCTGATTCACCTCATGATGAAAAACCTCTTATGAAGTTCGAGGTTCTCCCCAATGAAAGTGTTTCAGTCAAGGAAGACACATCAGAAGAATCATCCGGTCGAACTCTCAAACTTTTTGGGATGACTCTATTTGTAAATGATACCTGCAGACCATCATTTCCTCCAACAATTGAGGCATACAAACCAATACCTCTAACTATAGGTGTTCATTGCCTTAGCAAGGAGGATGGAAAATTGCAACTTGTTGGCCAGAGTACACCAAGTGAAACACCAGCAACATCCAAACTAAGGGTGAGAGTGAGACCTGAAACATGTGGGAAAGGGTTTGTGCCATATAAAAGGTGCACCCCAGAGAAAGGGAACCAGTCTTTATCAGTAACAGCTCATGAGAGAGAGGAGCAACGCATTCACCTTTCCTTATAG 1104 0.4194 MAIQDQNGFTRPRVGPPVGNGVSLSSGQHSVAHIQLNDQFSCGNDYALKVRKPYTITKQRERWTDEEHKKFLEALKLHGRAWRRIEEHVGTKTAVQIRSHAQKFFSKVLRDSSGKITNTEESIEIPPPRPKRKPMHPYPRKLAETPNKEISIPEELMKSNSLKSSDFDQDNQSPKSVLSAVGSDSLGSSDSDTPNGSLSPMSSISGVHTSGFTLAEPKTPSEEAALNSDSPHDEKPLMKFEVLPNESVSVKEDTSEESSGRTLKLFGMTLFVNDTCRPSFPPTIEAYKPIPLTIGVHCLSKEDGKLQLVGQSTPSETPATSKLRVRVRPETCGKGFVPYKRCTPEKGNQSLSVTAHEREEQRIHLSL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi531g00034 367 ProSiteProfiles SANT domain profile. 58 109 IPR017884 -
Sebi531g00034 367 PANTHER SWI/SNF COMPLEX-RELATED 43 296 - -
Sebi531g00034 367 FunFam protein REVEILLE 6 isoform X1 62 110 - -
Sebi531g00034 367 MobiDBLite consensus disorder prediction 125 143 - -
Sebi531g00034 367 Pfam Myb-like DNA-binding domain 60 103 IPR001005 -
Sebi531g00034 367 Gene3D - 62 108 - -
Sebi531g00034 367 SMART sant 59 107 IPR001005 -
Sebi531g00034 367 MobiDBLite consensus disorder prediction 116 235 - -
Sebi531g00034 367 SUPERFAMILY Homeodomain-like 54 107 IPR009057 -
Sebi531g00034 367 MobiDBLite consensus disorder prediction 1 24 - -
Sebi531g00034 367 MobiDBLite consensus disorder prediction 157 216 - -
Sebi531g00034 367 MobiDBLite consensus disorder prediction 347 367 - -
Sebi531g00034 367 NCBIfam myb-like DNA-binding domain, SHAQKYF class 58 107 IPR006447 GO:0003677
Sebi531g00034 367 ProSiteProfiles Myb-like domain profile. 55 105 IPR001005 -
Sebi531g00034 367 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 109 IPR017930 -
Sebi531g00034 367 CDD SANT 62 105 IPR001005 -
Sebi531g00034 367 MobiDBLite consensus disorder prediction 352 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi531g00034 Sebi-Chr531 602423 604807 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi531g00034 Myb_DNA-binding 6.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi531g00034 - - gmx:780539 540.806