Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi530g00033 ATGCCGGCTCTGAGAATACATGGATATGTCTTGGCTATTTCGTTTTGTTTTATCATCCTCAAAGCAGCCACACATCAAACAGATCCTTCAGAAGTAAATGCATTGAAGGATATCAAGAAAACTTTGATTGATCCTATGAACAGCCTGAGGAACTGGAATGAGGGTGACCATGCACACAAAATTGGACTGGGGTTTGGTGTTTTGATAGTGTTGGGACTGATGGTTACTTCCATGTCCGCGAACTCACCTCAGATTGGTCAGTTATCCCATCTTCAGATAATGAATTTCATGTGGAATAATCTGACAGGCAAGATACCAAAGGAGATTGGAAATATTACGTCCCTGAAACTCTTGCTATTAAATGGAAATAAATTAACTGGTAACTTACCAGATAAGCTGGGAAACCTTTCAAAATTGATTAGATTCCAAGTTGACCAAAACCAGCTCTCAGGTCCTATACCACAATCATTTACCAACTTGATCAAAGTTAGACACCTCCACATGAACAACAATTCATTTAATGGTCAAATTCCACACGACCTTTCAAGCTACCCAAGCTTCAGCACTTGTATGCTTGTGGACAATAATAACTTGTCTGGCTATCTTCCACCAGAATTCTCCATGTTGCCAGAATTGCGTATACTCCAACTTGATAACAATAATTTCAGCAGGACTGGAATTCCTTCTACCTATGCAAACTTATCCAGACTTGTAAAACTAAGTCTAAGAAACTGCAGTTTGCAAGGAGCTATTCCTGATTTCAGTTCAATATCCAATCTTAGTTATATAGATCTTAGTTGGAACCTTCTTACTGGACCTATACCATCAAATAAACTTTCAGACAATATAACCACTATTGATCTGTCCAATAATTATCTCAATGGATCAATCCCAAGAAGCTTCTCATATCTTCCACGTCTTCAAGAACTGTCACTAAAGAACAACTTCTTGTCCGGGTCCATACCTACTAGTATATGGAAGAACATGTCCTTCAGTATGAATGCTAAACTTGCAGTTGATCTCCGTAACAACTCACTTTCAGACATTTTGGGATATATGAACCCCCCAGAAAATGTCACCTTGAGGCTTGCTGGCAATCCTATCTGCAAGAACTCTAGCACGCAAAATATTGATCAATTCTGCAGAACTGAAGCAGATAAAGGTGCCAAAGACTCAACAAGTTCAACAGTTCACTGTCCAGTGCAAGCTTGTCCTGTTGACAATTTCTTTGAATATGTTCCAGCTTCCCCCATTCCCTGCTTTTGTGCATCTCCTCTGAGAATTGGATACCAGCTGAAAAGCCCAATAAATGTTGAGTCAGAGGGGAGTAAAACTAGTGCAAGCATATTAATAGCTGCTACTGTAGCATCTGTTGCTTGTGCAATAGCAATATCTGCATTAGTGACTTTCCTGATTGCTAGAAGATGTGCCAAATGCCAATACCAGCTTTCCAGGAAACGTATGTCCTCTGATAAATCCATCAGAATTGTTGGTATGAAAACATTTACATTTAAAGAATTGGCTCTAGCTACTGACAAATTTAGCAGCTCGAATAGAGTTGGCACAGGTGGTTATGGGAATGTTTATAAAGGCATTTTGTCTGATGATACACCTGTGGCCATAAAGCGAGCCGAAGAAGGCTCCTTACAAGGTCAAAAGGAATTTTTGACTGAGATTGAGCTTTTATCAAGGTTACATCATCGAAATCTTGTCTCATTGATTGGGTACTGTAATGAAAAAGGGGAGCAGATTCTGGTTTATGAATTCATGCCCAATGGCACACTACGGGAGTGGATCTTTGGTAAAAGTAAAACCAAGGAAAGCCTCAATTTTGGTACAAGATTAAGAATTGCAATGGATTCAGCCAAAGGCATACTATATCTGCATACTGAGGCTAACCCTCCTATATTTCACCGAGATATTAAGGCCAGTAATATACTTCTTGATTCCAATTTCACTGCAAAAGTAGCTGACTTTGGACTCTCACGGCTTGTACCATACCTTGATGATGAAGGAACTATGCCCAAGTATGTGTCAACAGTTGTGAGGGGAACACCTGGTTACCTGGATCCTGAGTACTTACTGACTCACAAGTTGACAGACAAATGTGATGTTTATAGCTTGGGAATTGTGTTTCTGGAGCTTTTGACCGGCATGAAACCAATATCACACGGAAAAAACATTGTTCGTGAG 2193 0.3981 MPALRIHGYVLAISFCFIILKAATHQTDPSEVNALKDIKKTLIDPMNSLRNWNEGDHAHKIGLGFGVLIVLGLMVTSMSANSPQIGQLSHLQIMNFMWNNLTGKIPKEIGNITSLKLLLLNGNKLTGNLPDKLGNLSKLIRFQVDQNQLSGPIPQSFTNLIKVRHLHMNNNSFNGQIPHDLSSYPSFSTCMLVDNNNLSGYLPPEFSMLPELRILQLDNNNFSRTGIPSTYANLSRLVKLSLRNCSLQGAIPDFSSISNLSYIDLSWNLLTGPIPSNKLSDNITTIDLSNNYLNGSIPRSFSYLPRLQELSLKNNFLSGSIPTSIWKNMSFSMNAKLAVDLRNNSLSDILGYMNPPENVTLRLAGNPICKNSSTQNIDQFCRTEADKGAKDSTSSTVHCPVQACPVDNFFEYVPASPIPCFCASPLRIGYQLKSPINVESEGSKTSASILIAATVASVACAIAISALVTFLIARRCAKCQYQLSRKRMSSDKSIRIVGMKTFTFKELALATDKFSSSNRVGTGGYGNVYKGILSDDTPVAIKRAEEGSLQGQKEFLTEIELLSRLHHRNLVSLIGYCNEKGEQILVYEFMPNGTLREWIFGKSKTKESLNFGTRLRIAMDSAKGILYLHTEANPPIFHRDIKASNILLDSNFTAKVADFGLSRLVPYLDDEGTMPKYVSTVVRGTPGYLDPEYLLTHKLTDKCDVYSLGIVFLELLTGMKPISHGKNIVRE 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi530g00033 731 Pfam Protein kinase domain 516 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi530g00033 731 SUPERFAMILY Protein kinase-like (PK-like) 494 724 IPR011009 -
Sebi530g00033 731 FunFam Leucine-rich repeat protein kinase family protein 478 589 - -
Sebi530g00033 731 Gene3D Transferase(Phosphotransferase) domain 1 590 731 - -
Sebi530g00033 731 FunFam Piriformospora indica-insensitive protein 2 82 179 - -
Sebi530g00033 731 Gene3D Phosphorylase Kinase; domain 1 484 589 - -
Sebi530g00033 731 Gene3D Ribonuclease Inhibitor 189 255 IPR032675 -
Sebi530g00033 731 ProSitePatterns Protein kinases ATP-binding region signature. 520 542 IPR017441 GO:0005524
Sebi530g00033 731 Gene3D Ribonuclease Inhibitor 256 408 IPR032675 -
Sebi530g00033 731 ProSiteProfiles Protein kinase domain profile. 514 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi530g00033 731 FunFam Os07g0541700 protein 590 680 - -
Sebi530g00033 731 ProSitePatterns Serine/Threonine protein kinases active-site signature. 636 648 IPR008271 GO:0004672|GO:0006468
Sebi530g00033 731 PANTHER RECEPTOR-LIKE PROTEIN 55 82 731 - -
Sebi530g00033 731 Gene3D Ribonuclease Inhibitor 28 188 IPR032675 -
Sebi530g00033 731 SMART serkin_6 514 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi530g00033 731 SUPERFAMILY L domain-like 69 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi530g00033 Sebi-Chr530 689487 697038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi530g00033 428 731 Receptor kinase-like Gene Family AT5G01950 67.427 1.97e-122 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Sebi530g00033 Pkinase 3.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi530g00033 - - lang:109325183 588.571